RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR2T12Q8NG77 320 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 GOT1L1Q8NHS2 421 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 RERGQ96A58 199 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 TM4SF18Q96CE8 201 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 TM4SF19Q96DZ7 209 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 SLC38A3Q99624 504 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 C17orf62Q9BQA9 187 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 INPP5KQ9BT40 448 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 VCX3BQ9H321 246 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 KAT8Q9H7Z6 458 aaKnown RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 THSD1Q9NS62 852 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 LYARQ9NX58 379 aaKnown RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 EHD3Q9NZN3 535 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 PILRAQ9UKJ1 303 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 VPS4AQ9UN37 437 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 EXO1Q9UQ84 846 aaKnown RBP8.21□□□□□ -1.09
TPM3-213ENST00000368545 COL6A6A6NMZ7 2263 aa8.21□□□□□ -1.09
TPM3-213ENST00000368545 GON4LQ3T8J9 2241 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 H3BNX3 289 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 RTCAO00442 366 aaKnown RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 ZSCAN9O15535 394 aaPredicted RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 ASNA1O43681 348 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 SCELO95171 688 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 BAG2O95816 211 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 DDAH2O95865 285 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 UMPSP11172 480 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ATP6V1B2P21281 511 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 PSMA4P25789 261 aaKnown RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 VHLP40337 213 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ARRB1P49407 418 aaPredicted RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 SELPLGQ14242 412 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 C14orf28Q4W4Y0 310 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ZNF385BQ569K4 471 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 FCRL6Q6DN72 434 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 VASNQ6EMK4 673 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ANKRD26P1Q6NSI1 321 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ABHD13Q7L211 337 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 VN1R4Q7Z5H5 301 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 SERPINA11Q86U17 422 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 PIK3C3Q8NEB9 887 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 OR4A15Q8NGL6 344 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 OR1N1Q8NGS0 311 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 OR10A6Q8NH74 314 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 ADAMTS18Q8TE60 1221 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 MIEF2Q96C03 454 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 FAM120BQ96EK7 910 aaKnown RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 TEFMQ96QE5 360 aaKnown RBP8.21□□□□□ -1.1
TPM3-213ENST00000368545 OR2A5Q96R48 311 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 CHST8Q9H2A9 424 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 NECTIN3Q9NQS3 549 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 BTBD3Q9Y2F9 522 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 KLHL20Q9Y2M5 609 aa8.21□□□□□ -1.1
TPM3-213ENST00000368545 URB1O60287 2271 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 A0A1B0GVT2 93 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 C1orf226A1L170 272 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ELOVL7A1L3X0 281 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 TTC36A6NLP5 189 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 CLIC1O00299 241 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 PPM1DO15297 605 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 TMPRSS11DO60235 418 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 LDOC1O95751 146 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 GPIP06744 558 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FAM58BPP0C7Q3 252 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 GPX2P18283 190 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 GGT1P19440 569 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FPR1P21462 350 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ATP5A1P25705 553 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 KCNJ5P48544 419 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 MC1RQ01726 317 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 BNIP3Q12983 259 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 DEFB133Q30KQ1 61 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 GTDC1Q4AE62 458 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FBXO42Q6P3S6 717 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ZNF793Q6ZN11 406 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ZNF621Q6ZSS3 439 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 SFTPA2Q8IWL1 248 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 MICU2Q8IYU8 434 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 CLECL1Q8IZS7 167 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ARL10Q8N8L6 244 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ACOT4Q8N9L9 421 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FAM47BQ8NA70 645 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 OR52E4Q8NGH9 312 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ZBED6CLQ96FA7 236 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 REXO5Q96IC2 774 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 NSMCE2Q96MF7 247 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ZNF583Q96ND8 569 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 AICDAQ9GZX7 198 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 RAD21L1Q9H4I0 556 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 BCO1Q9HAY6 547 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 PRDM7Q9NQW5 492 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 SLC6A13Q9NSD5 602 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 TAS2R7Q9NYW3 318 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ANAPC2Q9UJX6 822 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 AP4S1Q9Y587 144 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 UNC79Q9P2D8 2635 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 DNAH14Q0VDD8 3507 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 A0A0J9YVX5 310 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms