RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PRICKLE4Q2TBC4 344 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 RHBDD2Q6NTF9 364 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 LGI4Q8N135 537 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 RCBTB1Q8NDN9 531 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 OR7G2Q8NG99 324 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 OR7G1Q8NGA0 311 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SLC38A5Q8WUX1 472 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 KAT2AQ92830 837 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 GIMAP5Q96F15 307 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 NEURL2Q9BR09 285 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 PRTFDC1Q9NRG1 225 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 ADPRHL2Q9NX46 363 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 SIDT1Q9NXL6 827 aaKnown RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 P2RX2Q9UBL9 471 aa11.28□□□□□ -0.6
USF1-203ENST00000368021 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 C19orf53Q9UNZ5 99 aaPredicted RBP11.28□□□□□ -0.6
USF1-203ENST00000368021 IFNA14P01570 189 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 FUT4P22083 530 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 PTGER1P34995 402 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 SOX18P35713 384 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 MAN2A2P49641 1150 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 PRKAG1P54619 331 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 ID2Q02363 134 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 ZFP36L1Q07352 338 aaKnown RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 COL9A2Q14055 689 aaPredicted RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 GNA13Q14344 377 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 NKG7Q16617 165 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 MOGQ16653 247 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 SYT16Q17RD7 645 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 FHL5Q5TD97 284 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 LPCAT4Q643R3 524 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 HMBOX1Q6NT76 420 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 FKBP9P1Q75LS8 142 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 ZC3H7AQ8IWR0 971 aaKnown RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 ANKFN1Q8N957 763 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 TRUB1Q8WWH5 349 aaKnown RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 MAGED4Q96JG8 741 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 DHCR7Q9UBM7 475 aaKnown RBP11.27□□□□□ -0.61
USF1-203ENST00000368021 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 RARRES3Q9UL19 164 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 MMACHCQ9Y4U1 282 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 V9GYQ6 96 aa11.27□□□□□ -0.61
USF1-203ENST00000368021 DUXAA6NLW8 204 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 SUV39H1O43463 412 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 OR10H2O60403 315 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 TPST1O60507 370 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 DEAF1O75398 565 aaPredicted RBP11.26□□□□□ -0.61
USF1-203ENST00000368021 PDE9AO76083 593 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 ZNF682O95780 498 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 AGR2O95994 175 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 MT-CO3P00414 261 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 LDLRP01130 860 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 SEMG1P04279 462 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 OR12D1P0DN82 309 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 GALNSP34059 522 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 SELENOWP63302 87 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 MGAT2Q10469 447 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 STX4Q12846 297 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 MAP4K2Q12851 820 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 SERTAD2Q14140 314 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 ANKDD1AQ495B1 522 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 CYBRD1Q53TN4 286 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 ZCCHC12Q6PEW1 402 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 TUBA3EQ6PEY2 450 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 FAM111BQ6SJ93 734 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 TMPRSS12Q86WS5 348 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
USF1-203ENST00000368021 TRIM63Q969Q1 353 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 RBM18Q96H35 190 aaKnown RBP11.26□□□□□ -0.61
USF1-203ENST00000368021 TMEM19Q96HH6 336 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 OR6C1Q96RD1 312 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 PELOQ9BRX2 385 aaKnown RBP11.26□□□□□ -0.61
USF1-203ENST00000368021 DOHHQ9BU89 302 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 BDH2Q9BUT1 245 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 ZNF304Q9HCX3 659 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 LANCL2Q9NS86 450 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 MAT2BQ9NZL9 334 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 CEPT1Q9Y6K0 416 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 MAU2Q9Y6X3 613 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 FER1L5A0AVI2 2057 aa11.26□□□□□ -0.61
USF1-203ENST00000368021 CLOCKO15516 846 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 PRSS23O95084 383 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 BCHEP06276 602 aa11.25□□□□□ -0.61
USF1-203ENST00000368021 HBQ1P09105 142 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms