RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 VANGL1Q8TAA9 524 aaPredicted RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 APOBEC4Q8WW27 367 aaKnown RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 IPCEF1Q8WWN9 437 aaPredicted RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 COL26A1Q96A83 441 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 ISOC1Q96CN7 298 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 TRNT1Q96Q11 434 aaKnown RBP10.2□□□□□ -0.78
H3F3A-202ENST00000366814 OR7D2Q96RA2 312 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 YIPF4Q9BSR8 244 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 EQTNQ9NQ60 294 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 KCMF1Q9P0J7 381 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 CLCA2Q9UQC9 943 aa10.2□□□□□ -0.78
H3F3A-202ENST00000366814 PCDHGA12O60330 932 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 UBXN7O94888 489 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ADAP00813 363 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ALPPP05187 535 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 TYRP1P17643 537 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 DCKP27707 260 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 FMO3P31513 532 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GGT2P36268 569 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 FASLGP48023 281 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 LIMS1P48059 325 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 VSX2P58304 361 aaPredicted RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 MAPK11Q15759 364 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 FAM214AQ32MH5 1076 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 INAVAQ3KP66 663 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 DBX2Q6ZNG2 339 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GATAD2AQ86YP4 633 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 SDR16C5Q8N3Y7 309 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 AQP11Q8NBQ7 271 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ZNF540Q8NDQ6 660 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 C10orf90Q96M02 699 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 CDC6Q99741 560 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 UCK1Q9HA47 277 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 NMNAT1Q9HAN9 279 aaPredicted RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ANKHQ9HCJ1 492 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 EVA1BQ9NVM1 165 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 IMPAD1Q9NX62 359 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 KLHL28Q9NXS3 571 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 MGAT4BQ9UQ53 548 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 CCDC88CQ9P219 2028 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GOLGA4Q13439 2230 aaKnown RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 PCDH17O14917 1159 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 YKT6O15498 198 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 MPZL2O60487 215 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 CPMP14384 443 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GRK6P43250 576 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 LSSP48449 732 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 UGT2B15P54855 530 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 CDC42P60953 191 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 TEKQ02763 1124 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 MVKQ03426 396 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 DUSP2Q05923 314 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 RUNX2Q13950 521 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GPR107Q5VW38 600 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 CDC73Q6P1J9 531 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 B3GNT8Q7Z7M8 397 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ZNF761Q86XN6 746 aaPredicted RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 C19orf47Q8N9M1 422 aaKnown RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 OR9Q2Q8NGE9 314 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 OR13F1Q8NGS4 319 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 FAM81AQ8TBF8 368 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 LMX1AQ8TE12 382 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 KLHL6Q8WZ60 621 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 KAT2AQ92830 837 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 TANKQ92844 425 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 FNDC11Q9BVV2 318 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 RASSF1Q9NS23 344 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 GIN1Q9NXP7 522 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 NTMQ9P121 344 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 NAALAD2Q9Y3Q0 740 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 PCDHGA6Q9Y5G7 932 aa10.19□□□□□ -0.78
H3F3A-202ENST00000366814 TPRP12270 2363 aaKnown RBP10.19□□□□□ -0.78
H3F3A-202ENST00000366814 PRAMEF27A3QJZ7 478 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 LILRA5A6NI73 299 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 SYT5O00445 386 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 RGS10O43665 173 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 XPNPEP2O43895 674 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 OR10H3O60404 316 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 SRPX2O60687 465 aaPredicted RBP10.18□□□□□ -0.78
H3F3A-202ENST00000366814 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
H3F3A-202ENST00000366814 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 SEC14L2O76054 403 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 LGI1O95970 557 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 CHRM4P08173 479 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 ITIH1P19827 911 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 CBLP22681 906 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 SLC5A2P31639 672 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 PTGER1P34995 402 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 IDH2P48735 452 aaKnown RBP10.18□□□□□ -0.78
H3F3A-202ENST00000366814 TMBIM6P55061 237 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 HNRNPKP61978 463 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■□□□ 12.9
H3F3A-202ENST00000366814 BNIP3Q12983 259 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 ZNF311Q5JNZ3 666 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.18□□□□□ -0.78
H3F3A-202ENST00000366814 TCTN3Q6NUS6 607 aa10.18□□□□□ -0.78
H3F3A-202ENST00000366814 MFSD12Q6NUT3 480 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms