RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CNN1P51911 297 aaKnown RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 METAP1P53582 386 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 BNIP1Q12981 228 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 DHTKD1Q96HY7 919 aaPredicted RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 SDHCQ99643 169 aaPredicted RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 FAM213AQ9BRX8 229 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 OPN3Q9H1Y3 402 aaPredicted RBP2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 MIOXQ9UGB7 285 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 MEGF6O75095 1541 aa2.98□□□□□ -1.93
RNU4-28P-201ENST00000364739 CDC42BPBQ9Y5S2 1711 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 B4DXG7 233 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF861PO60384 105 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 LRP3O75074 770 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 SERF1AO75920 110 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 SYNGR4O95473 234 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 PGK2P07205 417 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 GSTA1P08263 222 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 AREGP15514 252 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 EFNA3P52797 238 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 PUDPQ08623 228 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 BTG3Q14201 252 aaPredicted RBP2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF699Q32M78 642 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 SCARA5Q6ZMJ2 495 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 DPY19L2P2Q6ZN68 376 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 KRT77Q7Z794 578 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 ATP6V1E2Q96A05 226 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 TMEM45BQ96B21 275 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 ZNF799Q96GE5 643 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 IMMP1LQ96LU5 166 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 HPS4Q9NQG7 708 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 STARD5Q9NSY2 213 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 LHX3Q9UBR4 397 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 BARX2Q9UMQ3 279 aaPredicted RBP2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 NEU3Q9UQ49 428 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
RNU4-28P-201ENST00000364739 ARID1AO14497 2285 aa2.96□□□□□ -1.93
RNU4-28P-201ENST00000364739 MACROD2A1Z1Q3 448 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CXCL14O95715 111 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 HOXC4P09017 264 aaPredicted RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF32P17041 273 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 MARCKSP29966 332 aaPredicted RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 ATP5DP30049 168 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 RFC2P35250 354 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 RBMXP38159 391 aaKnown RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCL11P51671 97 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 UCNP55089 124 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 NOP14P78316 857 aaKnown RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCZ1BP86790 482 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CCZ1P86791 482 aaPredicted RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 EIF2B1Q14232 305 aaKnown RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 HERPUD1Q15011 391 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 KYAT1Q16773 422 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CELF3Q5SZQ8 465 aaKnown RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 LGSNQ5TDP6 509 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 LIPKQ5VXJ0 399 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF57Q68EA5 555 aaPredicted RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 PNCKQ6P2M8 343 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 CHCHD4Q8N4Q1 142 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 MLKLQ8NB16 471 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 ADAMTS16Q8TE57 1224 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 MARC2Q969Z3 335 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 SPATA13Q96N96 652 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF184Q99676 751 aaPredicted RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 DPH7Q9BTV6 452 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 C19orf24Q9BVV8 132 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 TRPV6Q9H1D0 765 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 FAM153AQ9UHL3 310 aa2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 PURGQ9UJV8 347 aaKnown RBP2.96□□□□□ -1.94
RNU4-28P-201ENST00000364739 LRIT2A6NDA9 550 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 EMC8O43402 210 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF254O75437 659 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 IGLV1-47P01700 117 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 IGHV3-23P01764 117 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 APRTP07741 180 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF17P17021 662 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 CASP9P55211 416 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 RIPPLY3P57055 190 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 PSG7Q13046 419 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF528Q3MIS6 628 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 KHDRBS2Q5VWX1 349 aaKnown RBP2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 CWC27Q6UX04 472 aaKnown RBP2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 TOM1L2Q6ZVM7 507 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 MOB1BQ7L9L4 216 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 TRPM8Q7Z2W7 1104 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF410Q86VK4 478 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ERI1Q8IV48 349 aaKnown RBP2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 C9orf40Q8IXQ3 194 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 CADM2Q8N3J6 435 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 SETD7Q8WTS6 366 aaKnown RBP2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 DTD2Q96FN9 168 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 ZNF560Q96MR9 790 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 PLEKHF1Q96S99 279 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 C2orf40Q9H1Z8 148 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 CARD9Q9H257 536 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 FAM114A2Q9NRY5 505 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 FKBP7Q9Y680 259 aa2.95□□□□□ -1.94
RNU4-28P-201ENST00000364739 OR7A17O14581 309 aa2.94□□□□□ -1.94
RNU4-28P-201ENST00000364739 NME2P1O60361 137 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms