RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 CHDHQ8NE62 594 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 OR9A1PQ8NGU1 263 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 RFESDQ8TAC1 157 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 METTL6Q8TCB7 284 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 DNAJA4Q8WW22 397 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 ARHGEF2Q92974 986 aaKnown RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 SLC35C1Q96A29 364 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 PNPLA2Q96AD5 504 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 MOB3AQ96BX8 217 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 PYCR2Q96C36 320 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 ZNF274Q96GC6 653 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 TAAR1Q96RJ0 339 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 ALKBH7Q9BT30 221 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 RACGAP1Q9H0H5 632 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 CDC42EP4Q9H3Q1 356 aaKnown RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 DNAJC4Q9NNZ3 241 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 NLE1Q9NVX2 485 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 TAS2R10Q9NYW0 307 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 KCNN3Q9UGI6 736 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 PLAGL1Q9UM63 463 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 BARX2Q9UMQ3 279 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 SIGLEC9Q9Y336 463 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 NEUROG3Q9Y4Z2 214 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 OR51B4Q9Y5P0 310 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 SESN1Q9Y6P5 492 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 C2orf16Q68DN1 1984 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 CUL9Q8IWT3 2517 aa-0.91□□□□□ -2.56
RNU6-340P-201ENST00000364005 SCN4AP35499 1836 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 LRP2P98164 4655 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ANKRD30BQ9BXX2 1392 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 SLC28A1O00337 649 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 PGRMC2O15173 223 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 HCN1O60741 890 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 CCNKO75909 580 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 GLSO94925 669 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 STSP08842 583 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 RAB40ALP0C0E4 278 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 TLX1NBP0CAT3 122 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 P0DMU3 169 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 FAM231AP0DMU4 169 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 FAM231CP0DMU5 169 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 GABRB1P18505 474 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 PTBP1P26599 531 aaKnown RBP eCLIP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 BSGP35613 385 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ARL4CP56559 192 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 CTAG1AP78358 180 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 CDC20Q12834 499 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ABRQ12979 859 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 HSPB3Q12988 150 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 PICALMQ13492 652 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 RSPO1Q2MKA7 263 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 HKDC1Q2TB90 917 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 SLC9C2Q5TAH2 1124 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 NAA16Q6N069 864 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ZNF621Q6ZSS3 439 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 TOGARAM2Q6ZUX3 1019 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 FAM220AQ7Z4H9 259 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ARMC8Q8IUR7 673 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 COLGALT1Q8NBJ5 622 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 POGLUT1Q8NBL1 392 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ICA1LQ8NDH6 482 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 OR13C5Q8NGS8 318 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 OR5W2Q8NH69 310 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 TCP11Q8WWU5 503 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 UCN3Q969E3 161 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 EXOSC8Q96B26 276 aaKnown RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 RNF145Q96MT1 663 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 RNF5Q99942 180 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ELAC2Q9BQ52 826 aaKnown RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 ZNF416Q9BWM5 594 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 TM2D1Q9BX74 207 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 S100A14Q9HCY8 104 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 TRPC4Q9UBN4 977 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 OR12D3Q9UGF7 316 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 CPSF3Q9UKF6 684 aaKnown RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 HERC1Q15751 4861 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 IGF2RP11717 2491 aa-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 CENPJQ9HC77 1338 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-340P-201ENST00000364005 STRCP1A6NGW2 1772 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 KCPQ6ZWJ8 1503 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 SRRM2Q9UQ35 2752 aaKnown RBP-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 TRIP11Q15643 1979 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 IGHV3OR16-8A0A075B7F1 116 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 IGKV1-9A0A0C4DH69 117 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 A0A1W2PP18 115 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 H0YL77 283 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 ADAMDEC1O15204 470 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 TYROBPO43914 113 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 SDC3O75056 442 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 TNFSF13O75888 250 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 AKAP3O75969 853 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 AKR7A3O95154 331 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 STAG3L1P0CL83 205 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 HRES1P13985 223 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 UCP1P25874 307 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 NF2P35240 595 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 RGS2P41220 211 aa-0.93□□□□□ -2.56
RNU6-340P-201ENST00000364005 CRKLP46109 303 aaKnown RBP-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms