RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 OR12D1P0DN82 309 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ARAFP10398 606 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ACP2P11117 423 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 SOX11P35716 441 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 MAN2A2P49641 1150 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 EMDP50402 254 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 SLC37A1P57057 533 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 CORO7P57737 925 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 DMTNQ08495 405 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 SSPNQ14714 243 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ZNHIT3Q15649 155 aaPredicted RBP19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF630Q2M218 657 aaPredicted RBP19.17■□□□□ 0.66
SHISA4-201ENST00000362011 BROXQ5VW32 411 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF321PQ8N8H1 164 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 C11orf65Q8NCR3 313 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 OR1N1Q8NGS0 311 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 SLC9A6Q92581 669 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 RAB8BQ92930 207 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 OTUB1Q96FW1 271 aaPredicted RBP19.17■□□□□ 0.66
SHISA4-201ENST00000362011 WDR77Q9BQA1 342 aaPredicted RBP19.17■□□□□ 0.66
SHISA4-201ENST00000362011 NUDT9Q9BW91 350 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 CPNE5Q9HCH3 593 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 A4GALTQ9NPC4 353 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 P2RX2Q9UBL9 471 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 MAGEL2Q9UJ55 1249 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 PCDHGA6Q9Y5G7 932 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 SNX13Q9Y5W8 968 aa19.17■□□□□ 0.66
SHISA4-201ENST00000362011 COL6A6A6NMZ7 2263 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 TTC36A6NLP5 189 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 OR6C76A6NM76 312 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 SEC24DO94855 1032 aaPredicted RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 GGT1P19440 569 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 OTX2P32243 289 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 PCGF2P35227 344 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 MS4A2Q01362 244 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 PCOLCEQ15113 449 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 ADRM1Q16186 407 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 FXNQ16595 210 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 EXOSC6Q5RKV6 272 aaKnown RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 ATAD3BQ5T9A4 648 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 WDR53Q7Z5U6 358 aaPredicted RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 SLC30A8Q8IWU4 369 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 NFAM1Q8NET5 270 aaPredicted RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 B3GNT7Q8NFL0 401 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 C16orf52Q8NHV5 167 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 KCNE4Q8WWG9 221 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 XAGE5Q8WWM1 108 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 HOXB13Q92826 284 aaPredicted RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 KIAA1143Q96AT1 154 aaPredicted RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 NAF1Q96HR8 494 aaKnown RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 STACQ99469 402 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 MESP1Q9BRJ9 268 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 LMF2Q9BU23 707 aaKnown RBP19.16■□□□□ 0.66
SHISA4-201ENST00000362011 ZNF700Q9H0M5 742 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 PIGUQ9H490 435 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 EXD2Q9NVH0 621 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 ACTR3BQ9P1U1 418 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 NINQ8N4C6 2090 aa19.16■□□□□ 0.66
SHISA4-201ENST00000362011 IGHV1-45A0A0A0MS14 117 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 ACOT8O14734 319 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 ARPC2O15144 300 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SOX30O94993 753 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 F8A1P23610 371 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SLC26A5P58743 744 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SCARB2Q14108 478 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 VEZF1Q14119 521 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 FLOT2Q14254 428 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 DUSP5Q16690 384 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 GLYATQ6IB77 296 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 DHFR2Q86XF0 187 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SLC16A11Q8NCK7 471 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 NFKBIDQ8NI38 313 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 MAL2Q969L2 176 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 NCLNQ969V3 563 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SLC35A4Q96G79 324 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 VMP1Q96GC9 406 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 VPS50Q96JG6 964 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 VSTM2LQ96N03 204 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 TRIM15Q9C019 465 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 SEMA4CQ9C0C4 833 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 GPN2Q9H9Y4 310 aaPredicted RBP19.15■□□□□ 0.66
SHISA4-201ENST00000362011 DUSP22Q9NRW4 184 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 GIN1Q9NXP7 522 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 PPIEQ9UNP9 301 aaKnown RBP19.15■□□□□ 0.66
SHISA4-201ENST00000362011 ANGPT4Q9Y264 503 aa19.15■□□□□ 0.66
SHISA4-201ENST00000362011 H0YHG0 523 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 CXCR6O00574 342 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 SOCS6O14544 535 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 NKX2-2O95096 273 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 BCHEP06276 602 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 COX6A1P12074 109 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 NCK1P16333 377 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 MAP3K8P41279 467 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 GPR143P51810 404 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 CDK6Q00534 326 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 MYBPC3Q14896 1274 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 LCN8Q6JVE9 175 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 SLC29A4Q7RTT9 530 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 PPP1R32Q7Z5V6 425 aa19.14■□□□□ 0.65
SHISA4-201ENST00000362011 RAB43Q86YS6 212 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms