RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 TM9SF4Q92544 642 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SLC9A6Q92581 669 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 KISS1RQ969F8 398 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 PABPC5Q96DU9 382 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SAT2Q96F10 170 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 LINGO1Q96FE5 620 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 KCNA7Q96RP8 456 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 OCSTAMPQ9BR26 566 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 OPA3Q9H6K4 179 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 NOX3Q9HBY0 568 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TMEM184CQ9NVA4 438 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 GPR83Q9NYM4 423 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TEKT2Q9UIF3 430 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 BCS1LQ9Y276 419 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 POLR3HQ9Y535 204 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 PCDHB9Q9Y5E1 797 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 OR51B4Q9Y5P0 310 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SNX11Q9Y5W9 270 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF729A6NN14 1252 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 TLR4O00206 839 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 TNFRSF11BO00300 401 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF593O00488 134 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 MFN2O95140 757 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LYPD3O95274 346 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 RAB40ALP0C0E4 278 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HIST1H2AGP0C0S8 130 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HIST1H2ADP20671 130 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ACRV1P26436 265 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 MST1P26927 711 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PRDX3P30048 256 aaKnown RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HTR6P50406 440 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 AP3S2P59780 193 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 STX4Q12846 297 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CDK5R1Q15078 307 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 DECR1Q16698 335 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PDSS1Q5T2R2 415 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PHF19Q5T6S3 580 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HIST2H2AA3Q6FI13 130 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PSAPL1Q6NUJ1 521 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PAQR3Q6TCH7 311 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PRSS55Q6UWB4 352 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ARHGAP36Q6ZRI8 547 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LRRC17Q8N6Y2 441 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 TRPM4Q8TD43 1214 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 GLYATL2Q8WU03 294 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 THEM6Q8WUY1 208 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 POF1BQ8WVV4 589 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 RAB40AQ8WXH6 277 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 MS4A4AQ96JQ5 239 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LINC00615Q96LM1 132 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PRRC1Q96M27 445 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LINC00052Q96N35 136 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 FEVQ99581 238 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HIST1H2AJQ99878 128 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LBHD1Q9BQE6 289 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 WDCPQ9H6R7 721 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ERVK13-1Q9NX77 482 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 RBPJLQ9UBG7 517 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 A4GNTQ9UNA3 340 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PIN4Q9Y237 131 aaKnown RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PTPRSQ13332 1948 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 SMIM28A0A1B0GU29 152 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 LOC390937A0A1W2PQ73 354 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 YJEFN3A6XGL0 299 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 WASH3PC4AMC7 463 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 INO80B-WBP1J3KQ70 363 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PTGESO14684 152 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PPIHO43447 177 aaKnown RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CD74P04233 296 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 IL3P08700 152 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CNPP09543 421 aaKnown RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 INSRRP14616 1297 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CXCL2P19875 107 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 UQCRC2P22695 453 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 UCP1P25874 307 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 AOAHP28039 575 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PCSK1P29120 753 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 EIF2S3P41091 472 aaKnown RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CDKN2CP42773 168 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 KIR3DL1P43629 444 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ABCG1P45844 678 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 GLRBP48167 497 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 RGS4P49798 205 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 EPHB3P54753 998 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 BEX3Q00994 111 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 FABP5Q01469 135 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 PIGFQ07326 219 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 TSPAN31Q12999 210 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 VGLL4Q14135 290 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HLXQ14774 488 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ZIK1Q3SY52 487 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 CYP27C1Q4G0S4 372 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 OTUD3Q5T2D3 398 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 METRNLQ641Q3 311 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF660Q6AZW8 331 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-201ENST00000359785 FAM166AQ6J272 317 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 HEPHL1Q6MZM0 1159 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 NPSR1Q6W5P4 371 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 C3P1Q6ZMU1 363 aa4.24□□□□□ -1.73
PTPN22-201ENST00000359785 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms