RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FADDQ13158 208 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 ZNHIT3Q15649 155 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 DUSP5Q16690 384 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 RABL3Q5HYI8 236 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 HLA-DQA1Q5Y7H0 255 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 TCTN3Q6NUS6 607 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 C16orf89Q6UX73 402 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 NPSR1Q6W5P4 371 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 WDR53Q7Z5U6 358 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC15A3Q8IY34 581 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 PGAM4Q8N0Y7 254 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 LGI4Q8N135 537 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 GALNT16Q8N428 558 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 HORMAD2Q8N7B1 307 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 ADAMTS15Q8TE58 950 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 TMEM125Q96AQ2 219 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 LCORQ96JN0 433 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 THUMPD3Q9BV44 507 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 TRIM8Q9BZR9 551 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 LHPPQ9H008 270 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 NXF5Q9H1B4 397 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 OR51I1Q9H343 314 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 KAT8Q9H7Z6 458 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 DUSP22Q9NRW4 184 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 FRG2CA6NGY1 282 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 HMGN4O00479 90 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 TO15178 435 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 TNFRSF21O75509 655 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 DNAJB5O75953 348 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 ALOX5P09917 674 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 ETFAP13804 333 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 GABRA3P34903 492 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 CRATP43155 626 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 ANXA11P50995 505 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 GZMMP51124 257 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 CORO7P57737 925 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 MLF1P58340 268 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 MTPNP58546 118 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 MXRA7P84157 204 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 TNFAIP8L2Q6P589 184 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 RPS19BP1Q86WX3 136 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 OR5D16Q8NGK9 328 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 BRIX1Q8TDN6 353 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 THAP3Q8WTV1 239 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC9A6Q92581 669 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 GAL3ST4Q96RP7 486 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 LIN28AQ9H9Z2 209 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 CMTM6Q9NX76 183 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 TMEM181Q9P2C4 612 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 ABCD2Q9UBJ2 740 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 AP3M1Q9Y2T2 418 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 KCNE3Q9Y6H6 103 aa11.47□□□□□ -0.57
NIF3L1-201ENST00000359683 A8MUI8 341 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 ACOX3O15254 700 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 NADKO95544 446 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 AGR2O95994 175 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 OR12D1P0DN82 309 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 ITGA3P26006 1051 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 TRHRP34981 398 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 KHKP50053 298 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 PSPHP78330 225 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 CYP27C1Q4G0S4 372 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 LACTB2Q53H82 288 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 C16orf47Q6ZP98 133 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 SERPINA11Q86U17 422 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC44A2Q8IWA5 706 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC5A8Q8N695 610 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC15A4Q8N697 577 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 FAM110BQ8TC76 370 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 GPR151Q8TDV0 419 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 XAGE5Q8WWM1 108 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 JADE3Q92613 823 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 RAB8BQ92930 207 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 OTUB1Q96FW1 271 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 ZNF354BQ96LW1 612 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 CDCP1Q9H5V8 836 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 THUMPD1Q9NXG2 353 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 YARS2Q9Y2Z4 477 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 PCDHGB3Q9Y5G1 929 aa11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 SMG1Q96Q15 3661 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-201ENST00000359683 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 WWP2O00308 870 aa11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 NME4O00746 187 aa11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 ATXN7O15265 892 aaPredicted RBP11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 MAN1A2O60476 641 aa11.46□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF354AO60765 605 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms