RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 RPS3AP61247 264 aaKnown RBP8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 INAVAQ3KP66 663 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SMUG1Q53HV7 270 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 ZNF362Q5T0B9 420 aaPredicted RBP8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 AGAP7PQ5VUJ5 663 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 FAM20CQ8IXL6 584 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 CLIP4Q8N3C7 705 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 FBXL6Q8N531 539 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 OR52P1PQ8NH57 321 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 CCDC32Q9BV29 185 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SERHL2Q9H4I8 314 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC28A3Q9HAS3 691 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC25A19Q9HC21 320 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 WDR45Q9Y484 360 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PLEKHM1Q9Y4G2 1056 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 RIF1Q5UIP0 2472 aaKnown RBP8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC30A4O14863 429 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PPM1DO15297 605 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PRODHO43272 600 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 ARHGEF9O43307 516 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PROM1O43490 865 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 KLF8O95600 359 aaPredicted RBP8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 APBB3O95704 486 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 HMGN1P05114 100 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC15A1P46059 708 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 AVPR1BP47901 424 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 TNFRSF17Q02223 184 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 RAB40BQ12829 278 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 TSPAN31Q12999 210 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 DNASE1L3Q13609 305 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 ENTPD8Q5MY95 495 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 C18orf63Q68DL7 685 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 BTLAQ7Z6A9 289 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 CDK20Q8IZL9 346 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 TMCO6Q96DC7 493 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 MYADMQ96S97 322 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 NRTNQ99748 197 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 MACROD1Q9BQ69 325 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC30A2Q9BRI3 323 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PLA2G2FQ9BZM2 168 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 KLHL25Q9H0H3 589 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 MTHFD2LQ9H903 347 aaPredicted RBP8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 TAS2R16Q9NYV7 291 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 NLGN3Q9NZ94 848 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 ANKMY1Q9P2S6 941 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 PMF1-BGLAPU3KQ54 211 aa8.75□□□□□ -1.01
GTF3C2-202ENST00000359541 A0A075B6Q4 140 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CPSF4LA6NMK7 179 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 B4GALT2O60909 372 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 PRKRAO75569 313 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CKMT1AP12532 417 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 STAT5AP42229 794 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SOX9P48436 509 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SEPHS1P49903 392 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ZNF425Q6IV72 752 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ZBTB8BQ8NAP8 495 aaPredicted RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 OR52L1Q8NGH7 329 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 OR10G6Q8NH81 332 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ZCCHC10Q8TBK6 192 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 TMEM163Q8TC26 289 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 UFD1Q92890 307 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 OTULINQ96BN8 352 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ABHD8Q96I13 439 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 MKRN2Q9H000 416 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SPHK1Q9NYA1 384 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CLCA2Q9UQC9 943 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 LAMA3Q16787 3333 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ANTXRLA6NF34 631 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ZNF888P0CJ79 500 aaPredicted RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 EN2P19622 333 aaPredicted RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 HNRNPA2B1P22626 353 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 TGFBR1P36897 503 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 RAB30Q15771 203 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 PRRT3Q5FWE3 981 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 C3orf38Q5JPI3 329 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SLC25A30Q5SVS4 291 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ARMC6Q6NXE6 501 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 PARM1Q6UWI2 310 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 TMPRSS11AQ6ZMR5 421 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 RASSF6Q6ZTQ3 369 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ZER1Q7Z7L7 766 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 OR8H2Q8N162 312 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 IQCF1Q8N6M8 205 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 ACOT11Q8WXI4 607 aaPredicted RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 MCHR1Q99705 422 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 GABRG3Q99928 467 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CDADC1Q9BWV3 514 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SMURF1Q9HCE7 757 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 PTGFRNQ9P2B2 879 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 BTN3A3O00478 584 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CSO75390 466 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SNX4O95219 450 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 OR5F1O95221 314 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 PAICSP22234 425 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 KIR2DL1P43626 348 aaPredicted RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 SKP1P63208 163 aa8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 THOC7Q6I9Y2 204 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 TYW3Q6IPR3 259 aaKnown RBP8.74□□□□□ -1.01
GTF3C2-202ENST00000359541 CDC73Q6P1J9 531 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms