RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TPOP07202 933 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 RNF224P0DH78 156 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CTRB1P17538 263 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PGCP20142 388 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SLAMF1Q13291 335 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SLC36A3Q495N2 470 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 KCTD18Q6PI47 426 aaPredicted RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CHTF18Q8WVB6 975 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HHIPL1Q96JK4 782 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 GAL3ST2Q9H3Q3 398 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ASF1BQ9NVP2 202 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 FZD10Q9ULW2 581 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 TRBV11-1A0A0K0K1C0 115 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 LEFTY2O00292 366 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 GOSR1O95249 250 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SERPINA5P05154 406 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PFKMP08237 780 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CD46P15529 392 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 RORAP35398 523 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HNRNPA0Q13151 305 aaKnown RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 MLF2Q15773 248 aaPredicted RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 SPIN4Q56A73 249 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD3-202ENST00000358181 BATF2Q8N1L9 274 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SVOPLQ8N434 492 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 NUDT22Q9BRQ3 303 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CCDC106Q9BWC9 280 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 KCND1Q9NSA2 647 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ACOXLQ9NUZ1 547 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OR2M5A3KFT3 312 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ANKRD61A6NGH8 418 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 NKX6-3A6NJ46 265 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 GABRR3A8MPY1 467 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 UPK3BL1B0FP48 263 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 UPK3BL2E5RIL1 263 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 LIPCP11150 499 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ADH6P28332 368 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 BDKRB2P30411 391 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 DEFB134Q4QY38 66 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ZNF529Q6P280 563 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 MAMDC4Q6UXC1 1216 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PIM3Q86V86 326 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 NUP43Q8NFH3 380 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OR4A16Q8NH70 328 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 GEMIN6Q8WXD5 167 aaKnown RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 ARRDC3Q96B67 414 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SLC41A3Q96GZ6 507 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 C1QTNF6Q9BXI9 259 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 YIPF1Q9Y548 306 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ZNF728P0DKX0 622 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SERPINA2P20848 420 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PITPNBP48739 271 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 EDDM3AQ14507 147 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 TMEM44Q2T9K0 475 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 ZNF468Q5VIY5 522 aaPredicted RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 NRROSQ86YC3 692 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 GDF5P43026 501 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HSD17B7P56937 341 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 LILRA4P59901 499 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HHEXQ03014 270 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 SERPINA12Q8IW75 414 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 MARVELD2Q8N4S9 558 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OR52E2Q8NGJ4 325 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
CHD3-202ENST00000358181 APOBEC3GQ9HC16 384 aaKnown RBP9.3□□□□□ -0.92
CHD3-202ENST00000358181 ARHGAP23Q9P227 1491 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 IGLON5A6NGN9 336 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 MAN2B1O00754 1011 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 CILPO75339 1184 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 PENKP01210 267 aaPredicted RBP9.29□□□□□ -0.92
CHD3-202ENST00000358181 LCP2Q13094 533 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 RBM15BQ8NDT2 890 aaKnown RBP9.29□□□□□ -0.92
CHD3-202ENST00000358181 OR51D1Q8NGF3 324 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 MCHR1Q99705 422 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 LRRC4CQ9HCJ2 640 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 UGDHO60701 494 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 MAKP20794 623 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 GGT5P36269 586 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 AMIGO3Q86WK7 504 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 SAMD12Q8N8I0 201 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 C4orf32Q8N8J7 132 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 DCUN1D4Q92564 292 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 ART4Q93070 314 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 S1PR3Q99500 378 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 NMES1Q9C002 83 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 CPNE5Q9HCH3 593 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 TMED5Q9Y3A6 229 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 ATP23Q9Y6H3 246 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 FAM237AA0A1B0GTK4 181 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 CLIC1O00299 241 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 XPNPEP2O43895 674 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 SCELO95171 688 aa9.29□□□□□ -0.92
CHD3-202ENST00000358181 F11P03951 625 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms