RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MAGEB10Q96LZ2 347 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 RIOK2Q9BVS4 552 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 SPATA2Q9UM82 520 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 DMTF1Q9Y222 760 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 A0A1W2PR48 441 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GLI4P10075 376 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 LBPP18428 481 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GABRR2P28476 465 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GPC1P35052 558 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PRKAG1P54619 331 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CEP78Q5JTW2 689 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ASPHD1Q5U4P2 390 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GPRIN3Q6ZVF9 776 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PARS2Q7L3T8 475 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 AADATQ8N5Z0 425 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NFKBIDQ8NI38 313 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ZNF354BQ96LW1 612 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TREX2Q9BQ50 279 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 TSPAN10Q9H1Z9 355 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 DCSTAMPQ9H295 470 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PRORYQ9H606 182 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NSMCE4AQ9NXX6 385 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ZDHHC3Q9NYG2 299 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 HACD3Q9P035 362 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NLKQ9UBE8 527 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 FBLN5Q9UBX5 448 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 CDH9Q9ULB4 789 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PRPF19Q9UMS4 504 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 KLHDC2Q9Y2U9 406 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PCDHGB2Q9Y5G2 931 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 TMEM272A0A1B0GTI8 110 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SHISA8B8ZZ34 492 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 G3V2T6 193 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 GFYI3L273 518 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NPHS1O60500 1241 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 FAM20BO75063 409 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 IGKV1D-16P01601 117 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 LIPCP11150 499 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 HTR2AP28223 471 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 PCBP3P57721 371 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 POU4F1Q01851 419 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 LAPTM4BQ86VI4 370 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SLC38A9Q8NBW4 561 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 SEMA6DQ8NFY4 1073 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 ECHDC3Q96DC8 303 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 RACGAP1Q9H0H5 632 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NLE1Q9NVX2 485 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 ZNF230Q9UIE0 474 aaPredicted RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 RAB26Q9ULW5 256 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 NDRG2Q9UN36 371 aaKnown RBP5.22□□□□□ -1.57
CD47-201ENST00000355354 PIAS3Q9Y6X2 628 aa5.22□□□□□ -1.57
CD47-201ENST00000355354 LDB3O75112 727 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 WDR47O94967 919 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 BMP10O95393 424 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 IL11P20809 199 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 BNIP2Q12982 314 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 PRRT3Q5FWE3 981 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 ACBD5Q5T8D3 534 aaPredicted RBP5.21□□□□□ -1.57
CD47-201ENST00000355354 ANKS6Q68DC2 871 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 OR4C11Q6IEV9 310 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 KIAA0408Q6ZU52 694 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 HTR3DQ70Z44 454 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 MED8Q96G25 268 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 FAM129BQ96TA1 746 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 KCTD14Q9BQ13 255 aaPredicted RBP5.21□□□□□ -1.57
CD47-201ENST00000355354 C1QTNF3Q9BXJ4 246 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 ACTR6Q9GZN1 396 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 RDH14Q9HBH5 336 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 ZFP64Q9NPA5 681 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 EQTNQ9NQ60 294 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 PDP2Q9P2J9 529 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 MMP17Q9ULZ9 603 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 KCNK6Q9Y257 313 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 MSRB2Q9Y3D2 182 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 DSPPQ9NZW4 1301 aa5.21□□□□□ -1.57
CD47-201ENST00000355354 RPS10-NUDT3A0A1W2PQS6 291 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 CDC14CA4D256 554 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 H7C1C5 153 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SNPHO15079 494 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 RPP40O75818 363 aaKnown RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 FGF19O95750 216 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 FBXO45P0C2W1 286 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 MSH3P20585 1137 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 LCN6P62502 163 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 LTBQ06643 244 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 GPR50Q13585 617 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 FRG1Q14331 258 aaKnown RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 SYT6Q5T7P8 510 aaPredicted RBP5.21□□□□□ -1.58
CD47-201ENST00000355354 DCAF12L2Q5VW00 463 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 ZNF773Q6PK81 442 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 TMPRSS7Q7RTY8 843 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 FAM129CQ86XR2 697 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 LMNTD2Q8IXW0 634 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 NXPE1Q8N323 547 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 OR2I1PQ8NGU4 316 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 OR8K5Q8NH50 307 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 FOXP3Q9BZS1 431 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 ZDHHC5Q9C0B5 715 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 FAM83DQ9H4H8 585 aa5.21□□□□□ -1.58
CD47-201ENST00000355354 SNTG1Q9NSN8 517 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms