RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HS3ST5Q8IZT8 346 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 BMPERQ8N8U9 685 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 PRSS33Q8NF86 280 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF354BQ96LW1 612 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 AMBRA1Q9C0C7 1298 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 VN1R1Q9GZP7 353 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 THSD1Q9NS62 852 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 MKLN1Q9UL63 735 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 FCMRO60667 390 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 CBFA2T3O75081 653 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 IFNW1P05000 195 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 ITGA2P17301 1181 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 DCTP40126 519 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 OCA2Q04671 838 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 FUT7Q11130 342 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 NSDHLQ15738 373 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 C6orf52Q5T4I8 152 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 STT3BQ8TCJ2 826 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 PTPMT1Q8WUK0 201 aaPredicted RBP19.11■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF300Q96RE9 604 aaPredicted RBP19.11■□□□□ 0.65
TRIM4-202ENST00000354241 SDF2Q99470 211 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 OR10A5Q9H207 317 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 REEP1Q9H902 201 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 NCDNQ9UBB6 729 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 RAB26Q9ULW5 256 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 WDR45Q9Y484 360 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 AP4B1Q9Y6B7 739 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 DSPPQ9NZW4 1301 aa19.11■□□□□ 0.65
TRIM4-202ENST00000354241 NKX2-2O95096 273 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ZIC2O95409 532 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 RECKO95980 971 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 RRM2P31350 389 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 MAP3K8P41279 467 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 POU6F2P78424 691 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 MC2RQ01718 297 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 KCNC4Q03721 635 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 PUM1Q14671 1186 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 FRRS1Q6ZNA5 592 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 CHDHQ8NE62 594 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 VANGL1Q8TAA9 524 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF347Q96SE7 839 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 LMF2Q9BU23 707 aaKnown RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 TGIF2Q9GZN2 237 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 SAMHD1Q9Y3Z3 626 aaKnown RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 TESMINQ9Y4I5 508 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 TCRBV16S1A1N1A0A5B0 115 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 GXYLT2A0PJZ3 443 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 DYRK3O43781 588 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ZGLP1P0C6A0 271 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 PABPC4LP0CB38 370 aaKnown RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 CCKBRP32239 447 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 FOXL2P58012 376 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 DAG1Q14118 895 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 KIF26BQ2KJY2 2108 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF311Q5JNZ3 666 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 TYW3Q6IPR3 259 aaKnown RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 FIGNL1Q6PIW4 674 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 CARM1Q86X55 608 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 VRK2Q86Y07 508 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 C7orf57Q8NEG2 295 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ZG16BQ96DA0 208 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 Q9H521 79 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 AKAP7Q9P0M2 348 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 IFT80Q9P2H3 777 aaPredicted RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 SATB2Q9UPW6 733 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 DTX4Q9Y2E6 619 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 FAM32AQ9Y421 112 aaKnown RBP19.1■□□□□ 0.65
TRIM4-202ENST00000354241 CLCA3PQ9Y6N3 262 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 ENPP4Q9Y6X5 453 aa19.1■□□□□ 0.65
TRIM4-202ENST00000354241 CACNA1HO95180 2353 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 J3KTA2 159 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 CPNE3O75131 537 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 DNAJA1P31689 397 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 ARHGDIAP52565 204 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 SPIBQ01892 262 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 LAPTM4AQ15012 233 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 ELAVL1Q15717 326 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 GPR68Q15743 365 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 CSRP2Q16527 193 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 SWT1Q5T5J6 900 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF385CQ66K41 422 aaPredicted RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 FAAH2Q6GMR7 532 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 SHQ1Q6PI26 577 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 HIPK1Q86Z02 1210 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 APOBEC4Q8WW27 367 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 SENP5Q96HI0 755 aaPredicted RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 VSTM2LQ96N03 204 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 CDC6Q99741 560 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 PINK1Q9BXM7 581 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 COL25A1Q9BXS0 654 aaPredicted RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 SOX17Q9H6I2 414 aaPredicted RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 TRIM45Q9H8W5 580 aaPredicted RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 CACYBPQ9HB71 228 aaKnown RBP19.09■□□□□ 0.65
TRIM4-202ENST00000354241 PARD6AQ9NPB6 346 aa19.09■□□□□ 0.65
TRIM4-202ENST00000354241 IGLV3-12A0A075B6K2 115 aa19.08■□□□□ 0.65
TRIM4-202ENST00000354241 RFPL3O75679 317 aa19.08■□□□□ 0.65
TRIM4-202ENST00000354241 AK1P00568 194 aa19.08■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF28P17035 718 aa19.08■□□□□ 0.65
TRIM4-202ENST00000354241 FPR1P21462 350 aa19.08■□□□□ 0.65
TRIM4-202ENST00000354241 PRKACGP22612 351 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms