RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FFAR2O15552 330 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 BRINP1O60477 761 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 URODP06132 367 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CNR1P21554 472 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ENPP1P22413 925 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PPT1P50897 306 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DAOAP59103 153 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 C10orf120Q5SQS8 335 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GPC2Q8N158 579 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 LFNGQ8NES3 379 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SLC30A7Q8NEW0 376 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PIGBQ92521 554 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 AHCYL2Q96HN2 611 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 ASB8Q9H765 288 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 LRFN1Q9P244 771 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DPP7Q9UHL4 492 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PIN4Q9Y237 131 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 HIF3AQ9Y2N7 669 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 WDR45Q9Y484 360 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 J3QLW9 94 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 AP4M1O00189 453 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TERTO14746 1132 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 MED6O75586 246 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR2C1O95371 312 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SOX14O95416 240 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MT-ND4P03905 459 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZNF19P17023 458 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MC4RP32245 332 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 REEP5Q00765 189 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 VEZF1Q14119 521 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GINS1Q14691 196 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MAPK14Q16539 360 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 IQCJQ1A5X6 159 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GPR33Q49SQ1 333 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TXNRD3NBQ6F5E7 133 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SMARCD3Q6STE5 483 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PPP1R3BQ86XI6 285 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR5B17Q8NGF7 314 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 LMO3Q8TAP4 145 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 DDOQ99489 341 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR51V1Q9H2C8 321 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 FBXO44Q9H4M3 255 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CTSFQ9UBX1 484 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PLIN4Q96Q06 1357 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CPSF4LA6NMK7 179 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 LACTBL1A8MY62 500 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SGK494L7N484 410 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 B4GALT5O43286 388 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GJA5P36382 358 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RAG2P55895 527 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZNF91Q05481 1191 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 FOXO1Q12778 655 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TUSC1Q2TAM9 212 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MINDY4Q4G0A6 757 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 REEP3Q6NUK4 255 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 B3GNT9Q6UX72 402 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 USP51Q70EK9 711 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CILP2Q8IUL8 1156 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR10Q1Q8NGQ4 319 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 GNPDA2Q8TDQ7 276 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CASTOR1Q8WTX7 329 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 BRINP2Q9C0B6 783 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SEMA4CQ9C0C4 833 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 C20orf27Q9GZN8 174 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SCN3AQ9NY46 2000 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 FZD7O75084 574 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TOX4O94842 621 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 NME1P15531 152 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 HTR2CP28335 458 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 CNR2P34972 360 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KHKP50053 298 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RHOAP61586 193 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 AP1S1P61966 158 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 KCNC3Q14003 757 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 BAATQ14032 418 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 SOHLH1Q5JUK2 328 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SPOUT1Q5T280 376 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 IL34Q6ZMJ4 242 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 BEND7Q8N7W2 519 aaPredicted RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 DCBLD1Q8N8Z6 715 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 PNLDC1Q8NA58 520 aaKnown RBP4.79□□□□□ -1.64
SKP1-202ENST00000353411 DNAAF1Q8NEP3 725 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 OR8S1Q8NH09 359 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 HAVCR2Q8TDQ0 301 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 HBEGFQ99075 208 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 SEMA3CQ99985 751 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TMEM39BQ9GZU3 492 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 ZDBF2Q9HCK1 2354 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 TMX2-CTNND1H3BSU7 103 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 RAB40ALP0C0E4 278 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 EBLN1P0CF75 366 aa4.79□□□□□ -1.64
SKP1-202ENST00000353411 C1GALT1C1LP0DN25 315 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms