RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.95□□□□□ -0.18
NUP50-201ENST00000347635 PPIL3Q9H2H8 161 aaKnown RBP13.95□□□□□ -0.18
NUP50-201ENST00000347635 C12orf4Q9NQ89 552 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
NUP50-201ENST00000347635 IGLON5A6NGN9 336 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 WWP2O00308 870 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 SEMA4FO95754 770 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 H2AFB2P0C5Z0 115 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CR2P20023 1033 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CTSCP53634 463 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ZNF234Q14588 700 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 RPTNQ6XPR3 784 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 S100A16Q96FQ6 103 aaKnown RBP13.94□□□□□ -0.18
NUP50-201ENST00000347635 S100A13Q99584 98 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 COQ9O75208 318 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 TSPAN12O95859 305 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ACPPP15309 386 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 GPR19Q15760 415 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CTF1Q16619 201 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 TMEM35AQ53FP2 167 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 HLA-CQ95604 372 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 TCEAL4Q96EI5 215 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 RNF31Q96EP0 1072 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 SLC35C2Q9NQQ7 365 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 GMEB2Q9UKD1 530 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CA14Q9ULX7 337 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
NUP50-201ENST00000347635 PRELID1Q9Y255 219 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 A0A1W2PRQ8 180 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 IGLV3-27P01718 113 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 DNASE1L1P49184 302 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 PSMA6P60900 246 aaKnown RBP13.94□□□□□ -0.18
NUP50-201ENST00000347635 C4orf46Q504U0 113 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 NDUFAF5Q5TEU4 345 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 LCTLQ6UWM7 567 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ACTR6Q9GZN1 396 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 THSD1Q9NS62 852 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 CNIH4Q9P003 139 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 SLC22A31A6NKX4 558 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 C9J4A7 227 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ZNF670-ZNF695F2Z2N8 137 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 NKX3-2P78367 333 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 BCL2L15Q5TBC7 163 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ZNF676Q8N7Q3 588 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 SYT14Q8NB59 555 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 ZDHHC12Q96GR4 267 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 GPR174Q9BXC1 333 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 SIAEQ9HAT2 523 aa13.94□□□□□ -0.18
NUP50-201ENST00000347635 IQCMA0A1B0GVH7 501 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 GMFGO60234 142 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 SNAPC5O75971 98 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 RPP14O95059 124 aaKnown RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 APBB3O95704 486 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 IFNA6P05013 189 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 DNASE1P24855 282 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ZNF267Q14586 743 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 COX20Q5RI15 118 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 UBE2Q1Q7Z7E8 422 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 VRK3Q8IV63 474 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 HORMAD2Q8N7B1 307 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 CEP76Q8TAP6 659 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 GABARAPL3Q9BY60 117 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ZNF639Q9UID6 485 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 CPED1A4D0V7 1026 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 GFRA2O00451 464 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 TOMM20Q15388 145 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 AMZ1Q400G9 498 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 C8orf82Q6P1X6 216 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 NRMQ8IXM6 262 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 TDHQ8IZJ6 230 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 OR4E2Q8NGC2 313 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 DNAJA4Q8WW22 397 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 PRRC1Q96M27 445 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 DPH7Q9BTV6 452 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 RANGRFQ9HD47 186 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 TAS2R10Q9NYW0 307 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 A0A075B6Q4 140 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 FXYD6-FXYD2A0A087WZ82 144 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 FOXE1O00358 373 aaPredicted RBP13.93□□□□□ -0.18
NUP50-201ENST00000347635 HPGDSO60760 199 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 PDHA2P29803 388 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 PRLHRP49683 370 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 RIPPLY1Q0D2K3 151 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 SLC44A3Q8N4M1 653 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 YIPF7Q8N8F6 280 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 OR4K14Q8NGD5 310 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 FXYD6Q9H0Q3 95 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ANKRD12Q6UB98 2062 aa13.93□□□□□ -0.18
NUP50-201ENST00000347635 ZSCAN5BA6NJL1 495 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms