RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CDC42P60953 191 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TARDBPQ13148 414 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 Q7L0L9 218 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 DNAJC22Q8N4W6 341 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 RORBQ92753 470 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TCTN2Q96GX1 697 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PRR14Q9BWN1 585 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 GPR55Q9Y2T6 319 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CEP192Q8TEP8 1941 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 VCANP13611 3396 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 A0A087WV62 115 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 A0A0A6YYC8 382 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TRIM64BA6NI03 449 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 I3L1I5 382 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CHST10O43529 356 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SRPX2O60687 465 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SOX14O95416 240 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 FOSL2P15408 326 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PRKAR1BP31321 381 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ARHGAP11BQ3KRB8 267 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 C17orf82Q86X59 251 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ANKRD9Q96BM1 317 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SIGLEC11Q96RL6 698 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ARHGDIGQ99819 225 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MTHFD2LQ9H903 347 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MAT2BQ9NZL9 334 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PSORS1C1Q9UIG5 152 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 WDR45Q9Y484 360 aa13.19□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MED26O95402 600 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CT62P0C5K7 136 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 BCKDHBP21953 392 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CNR2P34972 360 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 NUDT6P53370 316 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 LSM11P83369 360 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ILKQ13418 452 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 INAVAQ3KP66 663 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TYW3Q6IPR3 259 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SVOPQ8N4V2 548 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 OR4K5Q8NGD3 323 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 FKBP10Q96AY3 582 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SPACA7Q96KW9 195 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SDF2Q99470 211 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PIGUQ9H490 435 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 UCKL1Q9NWZ5 548 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CLCA1A8K7I4 914 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 SLITRK5O94991 958 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 IGFBP1P08833 259 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CCNA2P20248 432 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 AVPR1BP47901 424 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 GFERP55789 205 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TAS2R41P59536 307 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TEKQ02763 1124 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MGAT2Q10469 447 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 EXOSC7Q15024 291 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PUS10Q3MIT2 529 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CCNJQ5T5M9 372 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ZER1Q7Z7L7 766 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ZNF675Q8TD23 568 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 CLDN23Q96B33 292 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 TRIM45Q9H8W5 580 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
CDK5RAP1-202ENST00000346416 COL6A3P12111 3177 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 H3BN98 237 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 FOXS1O43638 330 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ALOX5P09917 674 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MMP11P24347 488 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 ACVR2AP27037 513 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 HOXC5Q00444 222 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 MVKQ03426 396 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 EXOSC6Q5RKV6 272 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
CDK5RAP1-202ENST00000346416 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms