RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PIGXQ8TBF5 258 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 IPCEF1Q8WWN9 437 aaPredicted RBP12.52□□□□□ -0.41
CASC4-202ENST00000345795 COQ8BQ96D53 544 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 OR7D2Q96RA2 312 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 MAP3K3Q99759 626 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 SGPP1Q9BX95 441 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 LMAN2LQ9H0V9 348 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CASC4-202ENST00000345795 CUL9Q8IWT3 2517 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 HMGN4O00479 90 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 KIAA0513O60268 411 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 CTSVO60911 334 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 PAPLNO95428 1278 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 SLC2A10O95528 541 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 UGT2B7P16662 529 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 MAOAP21397 527 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 RPS6KA3P51812 740 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 EPHA5P54756 1037 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 NKAIN4Q8IVV8 208 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 LINC00471Q8N535 108 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 GGHQ92820 318 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 SAMD8Q96LT4 415 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 FRYLO94915 3013 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 PLD2O14939 933 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 PEPDP12955 493 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 BSGP35613 385 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 RAB30Q15771 203 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 FAM214AQ32MH5 1076 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 Q7L0L9 218 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 C1GALT1Q9NS00 363 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 MAFFQ9ULX9 164 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 K7EQS6 105 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 ADAM23O75077 832 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 F3P13726 295 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 PCSK2P16519 638 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 HOXA9P31269 272 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 GP2P55259 537 aaKnown RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 TSPYL5Q86VY4 417 aaPredicted RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 NRROSQ86YC3 692 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 DNAJB8Q8NHS0 232 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 ZDHHC1Q8WTX9 485 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 ACOT13Q9NPJ3 140 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 TIMMDC1Q9NPL8 285 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 DZANK1Q9NVP4 752 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 ZNF624Q9P2J8 865 aaPredicted RBP12.51□□□□□ -0.41
CASC4-202ENST00000345795 PCDHGA6Q9Y5G7 932 aa12.51□□□□□ -0.41
CASC4-202ENST00000345795 CHURC1-FNTBB4DL54 471 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 J3QLW9 94 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 OR5F1O95221 314 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ST6GAL1P15907 406 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ZNF19P17023 458 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ABHD17CQ6PCB6 329 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 CYP4Z2PQ8N1L4 340 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 CAMKVQ8NCB2 501 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 RCBTB1Q8NDN9 531 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 TMEM255BQ8WV15 326 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 SECISBP2Q96T21 854 aaKnown RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 SSR3Q9UNL2 185 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 REV3LO60673 3130 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ZFHX2Q9C0A1 2572 aaPredicted RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
CASC4-202ENST00000345795 NCR1O76036 304 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 CHRM4P08173 479 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 RHCEP18577 417 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 TPTEP56180 551 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 VEZF1Q14119 521 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ALG11Q2TAA5 492 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ASB18Q6ZVZ8 466 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 SLC30A8Q8IWU4 369 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 SYNPOQ8N3V7 929 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 SMPDL3BQ92485 455 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 CCNB1IP1Q9NPC3 277 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 MAPRE3Q9UPY8 281 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 GPR55Q9Y2T6 319 aaPredicted RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 TSC2P49815 1807 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 TCF20Q9UGU0 1960 aaKnown RBP12.5□□□□□ -0.41
CASC4-202ENST00000345795 IGHV3-20A0A0C4DH32 117 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 C1orf226A1L170 272 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 P2RX6O15547 441 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 SCO2O43819 266 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 ARAFP10398 606 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 PCYT1AP49585 367 aa12.5□□□□□ -0.41
CASC4-202ENST00000345795 BLVRAP53004 296 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms