RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FAM32AQ9Y421 112 aaKnown RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 GPC6Q9Y625 555 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-201ENST00000343575 CCDC88CQ9P219 2028 aa13.73□□□□□ -0.21
CXCL12-201ENST00000343575 IGLV3-12A0A075B6K2 115 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 IGKV3D-11A0A0A0MRZ8 115 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ELOVL7A1L3X0 281 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ABCB7O75027 752 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ALBP02768 609 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SLC35E2P0CK97 266 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 GPC1P35052 558 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 CHI3L1P36222 383 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 HSD17B7P56937 341 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 PROSER1Q86XN7 944 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SPPL2CQ8IUH8 684 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 HORMAD2Q8N7B1 307 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 MROQ9BYG7 248 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 IFT80Q9P2H3 777 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 FAM186AA6NE01 2351 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TCRBV5S2A0A599 114 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 BLACEA4D250 179 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 B4E171 279 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 CLDN25C9JDP6 229 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TM4SF5O14894 197 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 RECKO95980 971 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TFPTP0C1Z6 253 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 S1PR1P21453 382 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TSPAN7P41732 249 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 CRATP43155 626 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 GABARAPL2P60520 117 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 EEF1A2Q05639 463 aaKnown RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TOP3AQ13472 1001 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 TP53BP2Q13625 1128 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 MAPK11Q15759 364 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 VMACQ2NL98 169 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 NKAIN1Q4KMZ8 207 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 GLYATQ6IB77 296 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ANGPTL8Q6UXH0 198 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 OR2L13Q8N349 312 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 FAM110BQ8TC76 370 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SFXN5Q8TD22 340 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 ALOXE3Q9BYJ1 711 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 SEMA3GQ9NS98 782 aa13.72□□□□□ -0.21
CXCL12-201ENST00000343575 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
CXCL12-201ENST00000343575 NUP210LQ5VU65 1888 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 PRAMEF27A3QJZ7 478 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 HMGN4O00479 90 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CLDN4O14493 209 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 EI24O14681 340 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 FOXD2O60548 495 aaPredicted RBP13.71□□□□□ -0.21
CXCL12-201ENST00000343575 KRT75O95678 551 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 MT-CO3P00414 261 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 HPRP00739 348 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CRYBA2P53672 197 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 RHAGQ02094 409 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 FADDQ13158 208 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 DUSP8Q13202 625 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 OXA1LQ15070 435 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CYP51A1Q16850 503 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 SLC15A4Q8N697 577 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF675Q8TD23 568 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 NETO1Q8TDF5 533 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 C16orf58Q96GQ5 468 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 YIPF2Q9BWQ6 316 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CORO2BQ9UQ03 480 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 LOXL2Q9Y4K0 774 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 CFAP54Q96N23 3096 aa13.71□□□□□ -0.21
CXCL12-201ENST00000343575 HRKO00198 91 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 EMC8O43402 210 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 PLOD3O60568 738 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 CSO75390 466 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 MAN2A2P49641 1150 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 LIMK1P53667 647 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 ATP1A4Q13733 1029 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 NEDD8Q15843 81 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 SPDYE7PQ495Y7 208 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 NUP43Q8NFH3 380 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 TSLPQ969D9 159 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 LIN37Q96GY3 246 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 FBXL20Q96IG2 436 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 GORASP2Q9H8Y8 452 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 MKKSQ9NPJ1 570 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-201ENST00000343575 SLC39A1Q9NY26 324 aa13.7□□□□□ -0.22
CXCL12-201ENST00000343575 MAGEL2Q9UJ55 1249 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms