RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 FAM155BO75949 473 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ATP1B2P14415 290 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 GAREM2Q75VX8 874 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 SSX7Q7RTT5 188 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 OR4N2Q8NGD1 307 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ANKRD9Q96BM1 317 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 ACOT13Q9NPJ3 140 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 STEAP1Q9UHE8 339 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 BRWD1Q9NSI6 2320 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 A0A1W2PPH5 198 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TUBAL3A6NHL2 446 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TNFSF12O43508 249 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 P04436 131 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TBPP20226 339 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TGFBR3Q03167 851 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 RCAN2Q14206 197 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 HEPHL1Q6MZM0 1159 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 TMIGD1Q6UXZ0 262 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 SHFQ7M4L6 423 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 SH3YL1Q96HL8 342 aaPredicted RBP16.84■□□□□ 0.29
SMAD4-201ENST00000342988 SORCS2Q96PQ0 1159 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 CTRB1P17538 263 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 DSC2Q02487 901 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 PAGE3Q5JUK9 113 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 CTRB2Q6GPI1 263 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 OR2T4Q8NH00 348 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 CYP2W1Q8TAV3 490 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 FANCMQ8IYD8 2048 aa16.84■□□□□ 0.29
SMAD4-201ENST00000342988 MROH6A6NGR9 719 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 CAPN15O75808 1086 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 HRH2P25021 359 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 ANKRD13BQ86YJ7 626 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 CERS5Q8N5B7 392 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 SYT14Q8NB59 555 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 FAM156AQ8NDB6 213 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 PIP5K1AQ99755 562 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 OR10A5Q9H207 317 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 OR10A2Q9H208 303 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 SMIM35A0A1B0GVV1 85 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 A6NCN8 305 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 ANKRD30BLA7E2S9 258 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 AK1P00568 194 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 HOXA1P49639 335 aaPredicted RBP16.83■□□□□ 0.29
SMAD4-201ENST00000342988 PRKCZQ05513 592 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 ZNF718Q3SXZ3 478 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 AHCTF1Q8WYP5 2266 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 CYTIPO60759 359 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 L1CAMP32004 1257 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 FMO1Q01740 532 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 GALEQ14376 348 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 FGFBP1Q14512 234 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 WDR45BQ5MNZ6 344 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 ADAMTS18Q8TE60 1221 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 HCAR1Q9BXC0 346 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 RPH3ALQ9UNE2 315 aa16.83■□□□□ 0.29
SMAD4-201ENST00000342988 HPRP00739 348 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 DHPSP49366 369 aaPredicted RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 LRIT3Q3SXY7 679 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 DCUN1D3Q8IWE4 304 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 NT5C3BQ969T7 300 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 KATNB1Q9BVA0 655 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 AKTIPQ9H8T0 292 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 SH2D7A6NKC9 451 aaPredicted RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 DGKEP52429 567 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 INPP4AQ96PE3 977 aaPredicted RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 SAP130Q9H0E3 1048 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 ADORA3P0DMS8 318 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 OR5H8P0DN80 308 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 JUNDP17535 347 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 ADCYAP1R1P41586 468 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 DAP3P51398 398 aaKnown RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 CLCNKAP51800 687 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 PRPS1P60891 318 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 GJD4Q96KN9 370 aaPredicted RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 GPR20Q99678 358 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 AOC2O75106 756 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 VEGFAP15692 232 aaPredicted RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 IL3RAP26951 378 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 SNU13P55769 128 aaKnown RBP16.83■□□□□ 0.28
SMAD4-201ENST00000342988 ACBD7Q8N6N7 88 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 GAREM1Q9H706 876 aa16.83■□□□□ 0.28
SMAD4-201ENST00000342988 LOC105369274A0A096LPK9 316 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SERPINA5P05154 406 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SMIM17P0DL12 118 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF30P17039 623 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 PGCP20142 388 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 FBLP22087 321 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 MAP2K4P45985 399 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 MEX3BQ6ZN04 569 aaKnown RBP16.82■□□□□ 0.28
SMAD4-201ENST00000342988 OR4N4Q8N0Y3 316 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 P2RY13Q9BPV8 354 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 BCL7BQ9BQE9 202 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
SMAD4-201ENST00000342988 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms