RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 POLEQ07864 2286 aa17.63■□□□□ 0.41
SYNE4-202ENST00000340477 HIVEP3Q5T1R4 2406 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 OR6C70A6NIJ9 312 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 SDHDO14521 159 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CFLARO15519 480 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 ZIC2O95409 532 aaPredicted RBP17.62■□□□□ 0.41
SYNE4-202ENST00000340477 STSP08842 583 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CT45A8P0DMV1 189 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CT45A9P0DMV2 189 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CDK9P50750 372 aaKnown RBP17.62■□□□□ 0.41
SYNE4-202ENST00000340477 PRKAG1P54619 331 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 DIO3P55073 304 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 DECR1Q16698 335 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 DPY19L1Q2PZI1 675 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CYP27C1Q4G0S4 372 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CT45A2Q5DJT8 189 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 ARHGAP11AQ6P4F7 1023 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 NPSR1Q6W5P4 371 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 LARP4Q71RC2 724 aaKnown RBP eCLIP17.62■□□□□ 0.41
SYNE4-202ENST00000340477 SPATA19Q7Z5L4 167 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 WDR75Q8IWA0 830 aaKnown RBP17.62■□□□□ 0.41
SYNE4-202ENST00000340477 EID3Q8N140 333 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 NUP43Q8NFH3 380 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 SSC4DQ8WTU2 575 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 OR5P2Q8WZ92 322 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 C7orf26Q96N11 449 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 SNX8Q9Y5X2 465 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 LRRK2Q5S007 2527 aa17.62■□□□□ 0.41
SYNE4-202ENST00000340477 CLEC18AA5D8T8 446 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 PRRG2O14669 202 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 LRRTM2O43300 516 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 GLSO94925 669 aaPredicted RBP17.61■□□□□ 0.41
SYNE4-202ENST00000340477 KCNH1O95259 989 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 PSMG1O95456 288 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 EFNA1P20827 205 aaPredicted RBP17.61■□□□□ 0.41
SYNE4-202ENST00000340477 EPHA3P29320 983 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 MAGEA5P43359 124 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 PRIM2P49643 509 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 SNTA1Q13424 505 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 HYAL4Q2M3T9 481 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CMPK2Q5EBM0 449 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 C1QL3Q5VWW1 255 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 SLC30A6Q6NXT4 461 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 MTFR2Q6P444 385 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CLEC18BQ6UXF7 455 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CAMKMTQ7Z624 323 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 RIMKLAQ8IXN7 391 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 TMEM251Q8N6I4 163 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CDRT4Q8N9R6 151 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CLEC18CQ8NCF0 446 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 VPS37AQ8NEZ2 397 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 OR52N2Q8NGI0 321 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 MOAP1Q96BY2 351 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 COQ8BQ96D53 544 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 SLC35A4Q96G79 324 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 ADOQ96SZ5 270 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 ZBTB18Q99592 522 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 LMF2Q9BU23 707 aaKnown RBP17.61■□□□□ 0.41
SYNE4-202ENST00000340477 OSBPL11Q9BXB4 747 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 ANGPTL4Q9BY76 406 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 DEFB127Q9H1M4 99 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 LDAHQ9H6V9 325 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 EXO5Q9H790 373 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 ZDHHC11Q9H8X9 412 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 ZCCHC3Q9NUD5 404 aaKnown RBP17.61■□□□□ 0.41
SYNE4-202ENST00000340477 CBLCQ9ULV8 474 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 PCDHGB4Q9UN71 923 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 RELNP78509 3460 aa17.61■□□□□ 0.41
SYNE4-202ENST00000340477 GOLGA8QA0A0J9YX86 632 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 GOLGA8OA6NCC3 632 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 PRAMEF25A6NGN4 478 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 GOLGA8NF8WBI6 632 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 UGT2B11O75310 529 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 SEMA7AO75326 666 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 NME6O75414 186 aaPredicted RBP17.6■□□□□ 0.41
SYNE4-202ENST00000340477 SASH3O75995 380 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 KRT16P08779 473 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 ELAVL4P26378 380 aaKnown RBP17.6■□□□□ 0.41
SYNE4-202ENST00000340477 GDF1P27539 372 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 SOAT1P35610 550 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 CASP3P42574 277 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 KIR3DL1P43629 444 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 PNLIPRP2P54317 469 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 PSG6Q00889 435 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 FOXO1Q12778 655 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 SLC10A1Q14973 349 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 HSP90B2PQ58FF3 399 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 ANXA8L1Q5VT79 327 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 TMEM81Q6P7N7 255 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 ZCCHC12Q6PEW1 402 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 BHLHB9Q6PI77 547 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 FJX1Q86VR8 437 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 SPPL2CQ8IUH8 684 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 OR56A1Q8NGH5 318 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 GPR151Q8TDV0 419 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 JADE3Q92613 823 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 HGDQ93099 445 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 CHMP6Q96FZ7 201 aa17.6■□□□□ 0.41
SYNE4-202ENST00000340477 ZNF703Q9H7S9 590 aaPredicted RBP17.6■□□□□ 0.41
SYNE4-202ENST00000340477 QPCTLQ9NXS2 382 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms