RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CT45A8P0DMV1 189 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 CT45A9P0DMV2 189 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 GDF1P27539 372 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 MAPK1P28482 360 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 CHRNB4P30926 498 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 KRT20P35900 424 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 ASMTP46597 345 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 ZNF844Q08AG5 666 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 NNATQ16517 81 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 CT45A2Q5DJT8 189 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 EMC4Q5J8M3 183 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 C3P1Q6ZMU1 363 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 Q6ZSR9 355 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 PRR22Q8IZ63 422 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR2L13Q8N349 312 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 OR7G2Q8NG99 324 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 ZFP28Q8NHY6 868 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 TWIST2Q8WVJ9 160 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 KAT2AQ92830 837 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 HGDQ93099 445 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 MTERF3Q96E29 417 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 PPP3R2Q96LZ3 170 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 COL21A1Q96P44 957 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 MECRQ9BV79 373 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 OSBPL11Q9BXB4 747 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 UBQLN3Q9H347 655 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 TUBB1Q9H4B7 451 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 FOLH1BQ9HBA9 442 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 PNPLA3Q9NST1 481 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 KLRF1Q9NZS2 232 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 C19orf53Q9UNZ5 99 aaPredicted RBP12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 LIPGQ9Y5X9 500 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
SIRPB3P-201ENST00000340424 PRAMEF25A6NGN4 478 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 TM9SF1O15321 606 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZNHIT1O43257 154 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SHOX2O60902 331 aaPredicted RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 PSMG1O95456 288 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 JUNP05412 331 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 CHRNGP07510 517 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 LINC00032P0C843 101 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 MYZAPP0CAP1 466 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 IL12BP29460 328 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 GCKP35557 465 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 RPL3P39023 403 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ETV4P43268 484 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 CDK9P50750 372 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 RPL38P63173 70 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZNHIT3Q15649 155 aaPredicted RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZSCAN26Q16670 478 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 UGT3A2Q3SY77 523 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 CYP27C1Q4G0S4 372 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 NHSL2Q5HYW2 709 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SH2D4BQ5SQS7 431 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 LRIG3Q6UXM1 1119 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 B3GNT6Q6ZMB0 384 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 R3HCC1LQ7Z5L2 792 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 DDIASQ8IXT1 998 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 PM20D2Q8IYS1 436 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SIMC1Q8NDZ2 872 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR1J4Q8NGS1 313 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SDCCAG3Q96C92 435 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZBED6CLQ96FA7 236 aaPredicted RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 AMDHD1Q96NU7 426 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZIM3Q96PE6 472 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 GLIPR2Q9H4G4 154 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 REEP4Q9H6H4 257 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 DDX18Q9NVP1 670 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 MRTO4Q9UKD2 239 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 EXO1Q9UQ84 846 aaKnown RBP12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 ITPR2Q14571 2701 aa12.2□□□□□ -0.46
SIRPB3P-201ENST00000340424 DNAJC13O75165 2243 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PCNX1Q96RV3 2341 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ERICH4A6NGS2 130 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 BIRC5O15392 142 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PDPK1O15530 556 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ICOSLGO75144 302 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 UGT2B11O75310 529 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 REM1O75628 298 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 LRATO95237 230 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 COX6B1P14854 86 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 SDC1P18827 310 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 TACR1P25103 407 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 MC3RP41968 323 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PNLIPRP2P54317 469 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZNF155Q12901 538 aaPredicted RBP12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 PDE7AQ13946 482 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 ATP6AP1LQ52LC2 224 aa12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 RFTN2Q52LD8 501 aaPredicted RBP12.19□□□□□ -0.46
SIRPB3P-201ENST00000340424 XKR7Q5GH72 579 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms