RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CLDN16Q9Y5I7 305 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 TECTAO75443 2155 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A1W2PPC1 479 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 CPSF4LA6NMK7 179 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 CCNB2O95067 398 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 THY1P04216 161 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 GKN3PP0CG01 181 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 PRG2P13727 222 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 HOXB6P17509 224 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 PCMT1P22061 227 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 CHMP24386 653 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SSTR4P31391 388 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 OR1D4P47884 311 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 OCA2Q04671 838 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 KEAP1Q14145 624 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SHBQ15464 509 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ZBED5Q49AG3 693 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 BHLHB9Q6PI77 547 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 TMPRSS9Q7Z410 1059 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ZER1Q7Z7L7 766 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 C11orf74Q86VG3 221 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 APLFQ8IW19 511 aaPredicted RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 OR2I1PQ8NGU4 316 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 MAFAQ8NHW3 353 aaPredicted RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 DNASE2BQ8WZ79 361 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ISOC1Q96CN7 298 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 THAP11Q96EK4 314 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SDF2Q99470 211 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 GABARAPL3Q9BY60 117 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ANKHQ9HCJ1 492 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 LYRM4Q9HD34 91 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 BCL2L10Q9HD36 194 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 TUBA8Q9NY65 449 aaPredicted RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF226Q9NYT6 803 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 DHCR7Q9UBM7 475 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 RHPN2P1A8MT19 583 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 H1F0P07305 194 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 DDX5P17844 614 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 S1PR1P21453 382 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ALAS2P22557 587 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 NUDT1P36639 197 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 MASP1P48740 699 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 AFF3P51826 1226 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC35A2P78381 396 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 RELAQ04206 551 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 TARDBPQ13148 414 aaKnown RBP eCLIP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC13A2Q13183 592 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 FAM214AQ32MH5 1076 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 C14orf28Q4W4Y0 310 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 DCST1Q5T197 706 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 GTF2IRD2BQ6EKJ0 949 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 TYW3Q6IPR3 259 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 AHSA2Q719I0 299 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 GTF2IRD2Q86UP8 949 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 IQCHQ86VS3 1027 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 KRT73Q86Y46 540 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC30A8Q8IWU4 369 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 IQCF1Q8N6M8 205 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF540Q8NDQ6 660 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 C12orf43Q96C57 262 aaKnown RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 MMABQ96EY8 250 aaPredicted RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 MS4A4EQ96PG1 132 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 IL4I1Q96RQ9 567 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 NODALQ96S42 347 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 C11orf16Q9NQ32 467 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ZSCAN32Q9NX65 697 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 MS4A12Q9NXJ0 267 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 NTMQ9P121 344 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 REV1Q9UBZ9 1251 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ACAD8Q9UKU7 415 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 C19orf53Q9UNZ5 99 aaPredicted RBP6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 PCDHGA10Q9Y5H3 936 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM131Q92545 1883 aa6.9□□□□□ -1.3
SRFBP1-201ENST00000339397 ALPK2Q86TB3 2170 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 A0A0G2JPF8 293 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 HYKKA2RU49 373 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 HNRNPCL2B2RXH8 293 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 HNRNPCL3B7ZW38 293 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 PDE9AO76083 593 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 CBX7O95931 251 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 ATP1B1P05026 303 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 HNRNPCL4P0DMR1 293 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 ANXA8P13928 327 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 TNNI3P19429 210 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 MMP11P24347 488 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 CSF2RBP32927 897 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 GABRA3P34903 492 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 CNR2P34972 360 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 DHPSP49366 369 aaPredicted RBP6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 EFNA3P52797 238 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 C21orf59P57076 290 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 PLAURQ03405 335 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 MAP4K2Q12851 820 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 BROXQ5VW32 411 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 HEPHL1Q6MZM0 1159 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 CDC73Q6P1J9 531 aa6.9□□□□□ -1.31
SRFBP1-201ENST00000339397 PGBD2Q6P3X8 592 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms