RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MRPS22P82650 360 aaKnown RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 SRYQ05066 204 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 BTKQ06187 659 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EFR3AQ14156 821 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 LTB4RQ15722 352 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 UNC50Q53HI1 259 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF678Q5SXM1 525 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EEF1A1P5Q5VTE0 462 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TIFABQ6ZNK6 161 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TRMT10CQ7L0Y3 403 aaKnown RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 CHMP1BQ7LBR1 199 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 IFNEQ86WN2 208 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 PLCZ1Q86YW0 608 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TRIM42Q8IWZ5 723 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TMEM151AQ8N4L1 468 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 NOA1Q8NC60 698 aaKnown RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 MBD3L2Q8NHZ7 208 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 HGDQ93099 445 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TMBIM1Q969X1 311 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 EXOSC8Q96B26 276 aaKnown RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF681Q96N22 645 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF382Q96SR6 550 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ADOQ96SZ5 270 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 SH3GL2Q99962 352 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 YIPF4Q9BSR8 244 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ACBD3Q9H3P7 528 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 GALNT9Q9HCQ5 603 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TAS2R10Q9NYW0 307 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TAS2R9Q9NYW1 312 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 TMEM216Q9P0N5 145 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 HEY2Q9UBP5 337 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 DCDC2Q9UHG0 476 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 ST6GALNAC2Q9UJ37 374 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 GPR55Q9Y2T6 319 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-202ENST00000337571 OR10H1Q9Y4A9 318 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 MED13LQ71F56 2210 aa9.71□□□□□ -0.86
CAPN3-202ENST00000337571 KDM4EB2RXH2 506 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CASKO14936 926 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 TO15178 435 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 DLX3O60479 287 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CRCPO75575 148 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ENO1P06733 434 aaKnown RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ANXA4P09525 319 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 SBK3P0C264 359 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 GSTM5P46439 218 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CPA2P48052 419 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 PRKAA2P54646 552 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 PKNOX1P55347 436 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 HMGCS1Q01581 520 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 DUSP2Q05923 314 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 C2orf80Q0P641 193 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 LCP2Q13094 533 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 GAB1Q13480 694 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 DAZAP2Q15038 168 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 IMPG1Q17R60 797 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF628Q5EBL2 1059 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 TCHHL1Q5QJ38 904 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 DESI1Q6ICB0 168 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 POMZP3Q6PJE2 187 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 LARP4Q71RC2 724 aaKnown RBP eCLIP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CDC20BQ86Y33 519 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CCNYL1Q8N7R7 359 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 WDSUB1Q8N9V3 476 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 SIMC1Q8NDZ2 872 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 OR9A2Q8NGT5 310 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF675Q8TD23 568 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 C16orf78Q8WTQ4 265 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 KAT2AQ92830 837 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 TRIM44Q96DX7 344 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CCDC126Q96EE4 140 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ZFP3Q96NJ6 502 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 SHCBP1LQ9BZQ2 653 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 SLC35C2Q9NQQ7 365 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 SDHAF3Q9NRP4 125 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF225Q9UK10 706 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 DKKL1Q9UK85 242 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 CBLCQ9ULV8 474 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 F8P00451 2351 aa9.7□□□□□ -0.86
CAPN3-202ENST00000337571 FAM221AA4D161 298 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 GOLGA8RI6L899 631 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 RCBTB2O95199 551 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 GSTA1P08263 222 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ABHD2P08910 425 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CT45A8P0DMV1 189 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CT45A9P0DMV2 189 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CHN1P15882 459 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CHMP24386 653 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 ECHS1P30084 290 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SRD5A2P31213 254 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 TIA1P31483 386 aaKnown RBP eCLIP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 PTGDSP41222 190 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CLK3P49761 638 aaKnown RBP9.69□□□□□ -0.86
CAPN3-202ENST00000337571 PNLIPRP2P54317 469 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 DIO3P55073 304 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 NAA20P61599 178 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 SORDQ00796 357 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CEBPEQ15744 281 aa9.69□□□□□ -0.86
CAPN3-202ENST00000337571 CT45A2Q5DJT8 189 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms