RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LIX1Q8N485 282 aa25.29■■□□□ 1.64
ATPAF1-201ENST00000329231 ELP4Q96EB1 424 aa25.29■■□□□ 1.64
ATPAF1-201ENST00000329231 NODALQ96S42 347 aa25.29■■□□□ 1.64
ATPAF1-201ENST00000329231 SH3BP4Q9P0V3 963 aa25.29■■□□□ 1.64
ATPAF1-201ENST00000329231 OR10H1Q9Y4A9 318 aa25.29■■□□□ 1.64
ATPAF1-201ENST00000329231 FIGNL2A6NMB9 653 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 UPK1AO00322 258 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 PEX11AO75192 247 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 SKAP2O75563 359 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 DHRS4L1P0CG22 281 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 H2AFXP16104 143 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 DDX5P17844 614 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 ELAVL4P26378 380 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 ZNF787Q6DD87 383 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 DESI1Q6ICB0 168 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 ANKRD26P1Q6NSI1 321 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 NPSR1Q6W5P4 371 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 R3HCC1LQ7Z5L2 792 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 OR5M9Q8NGP3 310 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 CLHC1Q8NHS4 586 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 ZFP28Q8NHY6 868 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 NTNG2Q96CW9 530 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 MTERF3Q96E29 417 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 ZBED6CLQ96FA7 236 aaPredicted RBP25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 SLC35A4Q96G79 324 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 OSBPL11Q9BXB4 747 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 PNPLA3Q9NST1 481 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 KLRF1Q9NZS2 232 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 C15orf41Q9Y2V0 281 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 PCNX1Q96RV3 2341 aa25.28■■□□□ 1.64
ATPAF1-201ENST00000329231 IL12BP29460 328 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 PDE7AQ13946 482 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 EFR3AQ14156 821 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 WLSQ5T9L3 541 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 FNDC7Q5VTL7 733 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 TIGD3Q6B0B8 471 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 SP5Q6BEB4 398 aaPredicted RBP25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 OR1J4Q8NGS1 313 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 NEIL3Q8TAT5 605 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 TLCD1Q96CP7 247 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 C3orf30Q96M34 536 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 GNRHR2Q96P88 292 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 ADOQ96SZ5 270 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 SLC6A15Q9H2J7 730 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 COQ3Q9NZJ6 369 aa25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 NCOA6Q14686 2063 aaPredicted RBP25.27■■□□□ 1.64
ATPAF1-201ENST00000329231 EXPH5Q8NEV8 1989 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 PRAMEF25A6NGN4 478 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ICOSLGO75144 302 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 LYPLA1O75608 230 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 TRAPPC6AO75865 159 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 SNUPNO95149 360 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 PSMG1O95456 288 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 CLDN14O95500 239 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 GRK2P25098 689 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 HTR1EP28566 365 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 GPC1P35052 558 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ABCE1P61221 599 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 MAGOHP61326 146 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 MRPS22P82650 360 aaKnown RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 HSPB3Q12988 150 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNHIT3Q15649 155 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF630Q2M218 657 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF385BQ569K4 471 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF585AQ6P3V2 769 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ANGPTL8Q6UXH0 198 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 LARP4Q71RC2 724 aaKnown RBP eCLIP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 ZNF551Q7Z340 670 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 CIDECQ96AQ7 238 aaPredicted RBP25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 UBQLN3Q9H347 655 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 CHST11Q9NPF2 352 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 SPRR3Q9UBC9 169 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 TNFRSF10DQ9UBN6 386 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 GIMAP2Q9UG22 337 aa25.26■■□□□ 1.63
ATPAF1-201ENST00000329231 GNB5O14775 395 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 ITM2AO43736 263 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 TSPAN2O60636 221 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 HPNP05981 417 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 ENDOUP21128 410 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 ACVR2AP27037 513 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 HPCAL1P37235 193 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 RPL3P39023 403 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 TRPC1P48995 793 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 CDK9P50750 372 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 PNLIPRP2P54317 469 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 MANFP55145 182 aaKnown RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 PSG6Q00889 435 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 CYP27C1Q4G0S4 372 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 C6orf136Q5SQH8 315 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 CES4AQ5XG92 561 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 HDXQ7Z353 690 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 MARVELD2Q8N4S9 558 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 FNDC5Q8NAU1 212 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 SDCCAG3Q96C92 435 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 GALNT9Q9HCQ5 603 aa25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 ACSS1Q9NUB1 689 aaPredicted RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.25■■□□□ 1.63
ATPAF1-201ENST00000329231 TMEM120BA0PK00 339 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 TTC36A6NLP5 189 aa25.24■■□□□ 1.63
ATPAF1-201ENST00000329231 WDR1O75083 606 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms