RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TRBV5-3A0A0A0MS03 114 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 A0A1W2PNU3 283 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SCN2BO60939 215 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 LDB3O75112 727 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SH3BGRLO75368 114 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SEC24DO94855 1032 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 UNC5CO95185 931 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 CBX7O95931 251 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PRKAR1BP31321 381 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PTGER4P35408 488 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MC3RP41968 323 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC7A2P52569 658 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 NCALDP61601 193 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 C17orf67Q0P5P2 114 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MGAT2Q10469 447 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 KCNAB2Q13303 367 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF141Q15928 474 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ACER2Q5QJU3 275 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 RNF220Q5VTB9 566 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM198Q66K66 360 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM107Q6UX40 140 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ANGPTL8Q6UXH0 198 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 EIF3MQ7L2H7 374 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SZRD1Q7Z422 152 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 GRAMD2AQ8IUY3 354 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC44A2Q8IWA5 706 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 CLHC1Q8NHS4 586 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 DNAJC9Q8WXX5 260 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 DIO2Q92813 273 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OTUB1Q96FW1 271 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PPP1R36Q96LQ0 422 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 KCTD14Q9BQ13 255 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 NUDT9Q9BW91 350 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 UGT2B28Q9BY64 529 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PRORYQ9H606 182 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PIF1Q9H611 641 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MAGIXQ9H6Y5 334 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SIRT3Q9NTG7 399 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 BAIAP2L1Q9UHR4 511 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ENOPH1Q9UHY7 261 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SNX13Q9Y5W8 968 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 UNC13CQ8NB66 2214 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ELOVL7A1L3X0 281 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 C7orf72A4D263 438 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 AQP12BA6NM10 295 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC28A2O43868 658 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 REM1O75628 298 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 DNAJC8O75937 253 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 CNR1P21554 472 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ME2P23368 584 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ARG2P78540 354 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 BTG2P78543 158 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 BNIP1Q12981 228 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MFSD13AQ14CX5 517 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 RGNQ15493 299 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 DEFB109BQ30KR1 87 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF385BQ569K4 471 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 DCST2Q5T1A1 773 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SWT1Q5T5J6 900 aaKnown RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ADNP2Q6IQ32 1131 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ZFP1Q6P2D0 407 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PACS2Q86VP3 889 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 RANBP3LQ86VV4 465 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC22A16Q86VW1 577 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 AQP12AQ8IXF9 295 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 KRTCAP2Q8N6L1 136 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OR6S1Q8NH40 331 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 C16orf52Q8NHV5 167 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SLC25A43Q8WUT9 341 aaPredicted RBP4.79□□□□□ -1.64
LRIT3-201ENST00000327908 WDR60Q8WVS4 1066 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OR7D2Q96RA2 312 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 NRTNQ99748 197 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MACROD1Q9BQ69 325 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 BTBD10Q9BSF8 475 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 OSBPL11Q9BXB4 747 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 TBL1XR1Q9BZK7 514 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 LRMDAQ9H2I8 198 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 CXorf36Q9H7Y0 433 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 FANCFQ9NPI8 374 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 SERINC1Q9NRX5 453 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 AGPAT4Q9NRZ5 378 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 WDR45Q9Y484 360 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 PTGDR2Q9Y5Y4 395 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 MUC6Q6W4X9 2439 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 RP1P56715 2156 aa4.79□□□□□ -1.64
LRIT3-201ENST00000327908 ARGFXA6NJG6 315 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 FAM227AF5H4B4 570 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 UPK1AO00322 258 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 KIAA0513O60268 411 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 STATHP02808 62 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF17P17021 662 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 PGCP20142 388 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 CAPN3P20807 821 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 ELK4P28324 431 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 ADH6P28332 368 aa4.78□□□□□ -1.64
LRIT3-201ENST00000327908 MAP3K8P41279 467 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms