RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
COL9A1-201ENST00000320755 ARSGQ96EG1 525 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 PLA2G2FQ9BZM2 168 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 MPIP34949 423 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 TRHRP34981 398 aaPredicted RBP16.35■□□□□ 0.21
COL9A1-201ENST00000320755 COPZ1P61923 177 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 TMEM35AQ53FP2 167 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 NKAIN4Q8IVV8 208 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 FLCNQ8NFG4 579 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 IL17RDQ8NFM7 739 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 DIRAS2Q96HU8 199 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 OR2A14Q96R47 310 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 DIMT1Q9UNQ2 313 aaKnown RBP16.35■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3DA0A087WVF3 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3IA0A087WXS9 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3EA0A087X179 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3KA0A087X1G2 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 A0A1W2PQL4 384 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3FA6NER0 549 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3LB9A6J9 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ALPPP05187 535 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 CA3P07451 260 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3HP0C7X1 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 GNSP15586 552 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 PKLRP30613 574 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TRIM23P36406 574 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ATP6V1E1P36543 226 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 PRR5P85299 388 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 CDK5Q00535 292 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 KRR1Q13601 381 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MLC1Q15049 377 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3GQ6DHY5 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3CQ6IPX1 549 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 YAF2Q8IY57 180 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D3Q8IZP1 549 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ANKK1Q8NFD2 765 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 OR2L5Q8NG80 312 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 OR4F15Q8NGB8 312 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 SLC38A1Q9H2H9 487 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 DPP7Q9UHL4 492 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 DNMT3AQ9Y6K1 912 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 DYRK3O43781 588 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 PEBP1P30086 187 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 HOXD12P35452 270 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 SOX18P35713 384 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MTNR1AP48039 350 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TRA2BP62995 288 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ID2Q02363 134 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 GPM6BQ13491 265 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 SF3B4Q15427 424 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF79Q15937 498 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TMEM53Q6P2H8 277 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TTLQ8NG68 377 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 OR2L8Q8NGY9 312 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ZCCHC10Q8TBK6 192 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 PHOX2BQ99453 314 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 BTBD1Q9H0C5 482 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 C3orf14Q9HBI5 128 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MALT1Q9UDY8 824 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 CA5BQ9Y2D0 317 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF780BQ9Y6R6 833 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 NUP210Q8TEM1 1887 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 KIF26AQ9ULI4 1882 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 A0A0G2JPF8 293 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 A0A1W2PQ09 198 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 HNRNPCL2B2RXH8 293 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 HNRNPCL3B7ZW38 293 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 HNRNPCL4P0DMR1 293 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 AK4P27144 223 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ETV6P41212 452 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ANXA11P50995 505 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 RGS8P57771 180 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 UBE3AQ05086 875 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 KIAA1211LQ6NV74 962 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MTSS1LQ765P7 747 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 SLC16A11Q8NCK7 471 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 NACC2Q96BF6 587 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 ELP4Q96EB1 424 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 PITHD1Q9GZP4 211 aaPredicted RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MKRN2Q9H000 416 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 MMP28Q9H239 520 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D17Q9HA65 648 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 BCL2L10Q9HD36 194 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 TESQ9UGI8 421 aaKnown RBP16.34■□□□□ 0.21
COL9A1-201ENST00000320755 CMAHPQ9Y471 501 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 V9GYH0 126 aa16.34■□□□□ 0.21
COL9A1-201ENST00000320755 BTN3A3O00478 584 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 TMCC2O75069 709 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 PDX1P52945 283 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 WNT4P56705 351 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 PSPHP78330 225 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 ZIC1Q15915 447 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 SLC48A1Q6P1K1 146 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 ADAMTS15Q8TE58 950 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 PINK1Q9BXM7 581 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 DDX28Q9NUL7 540 aaKnown RBP16.33■□□□□ 0.21
COL9A1-201ENST00000320755 ZSCAN32Q9NX65 697 aa16.33■□□□□ 0.21
COL9A1-201ENST00000320755 EMC8O43402 210 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms