RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CHMP24386 653 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GCKP35557 465 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 PPICP45877 212 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
RPP40-201ENST00000319533 LTBQ06643 244 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GAB1Q13480 694 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 TTC19Q6DKK2 380 aaPredicted RBP12.92□□□□□ -0.34
RPP40-201ENST00000319533 EMBQ6PCB8 327 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 ENPP6Q6UWR7 440 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 CXorf67Q86X51 503 aaPredicted RBP12.92□□□□□ -0.34
RPP40-201ENST00000319533 ZNF681Q96N22 645 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 ITPAQ9BY32 194 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 PIGMQ9H3S5 423 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 SERHLQ9NQF3 203 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GALNT8Q9NY28 637 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 CLCF1Q9UBD9 225 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
RPP40-201ENST00000319533 SH3D21A4FU49 640 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 PRAMEF25A6NGN4 478 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 SMIM23A6NLE4 172 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 A8MT66 165 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 A8MXE2 369 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 ERLIN1O75477 346 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 RPS17P08708 135 aaKnown RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 INHBBP09529 407 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 CSNK2A2P19784 350 aaPredicted RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 SRD5A2P31213 254 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 EMDP50402 254 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 MAPK12P53778 367 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 GALNT1Q10472 559 aaPredicted RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 IFT88Q13099 833 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 NNATQ16517 81 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 SCIMPQ6UWF3 145 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 COMMD6Q7Z4G1 85 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 TDRPQ86YL5 185 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 TRIM42Q8IWZ5 723 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 SIMC1Q8NDZ2 872 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 RNF138Q8WVD3 245 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 TM4SF18Q96CE8 201 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 NSUN5Q96P11 429 aaKnown RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 SMR3AQ99954 134 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 ELOVL6Q9H5J4 265 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
RPP40-201ENST00000319533 TMEM216Q9P0N5 145 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 PRODH2Q9UF12 536 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 DCDC2Q9UHG0 476 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 MAPRE3Q9UPY8 281 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 PLLPQ9Y342 182 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
RPP40-201ENST00000319533 FN1P02751 2386 aaKnown RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 FRG2CA6NGY1 282 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 H0Y3Z8 333 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 HCRTR2O43614 444 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 GLRA3O75311 464 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 TNFSF13O75888 250 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 SHBGP04278 402 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 SBK3P0C264 359 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 ZNF708P17019 499 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 LHX2P50458 406 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 HMGCS1Q01581 520 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 DUSP2Q05923 314 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 LUZP2Q86TE4 346 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 SLC22A9Q8IVM8 553 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 LRRC75A-AS1Q8N1F1 130 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 TMEM151AQ8N4L1 468 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 MREGQ8N565 214 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 OR4F6Q8NGB9 312 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 ZNF675Q8TD23 568 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 ZNF483Q8TF39 744 aaPredicted RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 MZB1Q8WU39 189 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 INTS12Q96CB8 462 aaKnown RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 ARSGQ96EG1 525 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 SLC35A4Q96G79 324 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 C1QTNF3Q9BXJ4 246 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 BRINP2Q9C0B6 783 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 BRF2Q9HAW0 419 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 TAS2R10Q9NYW0 307 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 KLRF1Q9NZS2 232 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 PACSIN3Q9UKS6 424 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 DLGAP4Q9Y2H0 992 aa12.9□□□□□ -0.34
RPP40-201ENST00000319533 GPR55Q9Y2T6 319 aaPredicted RBP12.9□□□□□ -0.34
RPP40-201ENST00000319533 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms