RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 BTN3A3O00478 584 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 ERAL1O75616 437 aaKnown RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 SLITRK5O94991 958 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 HSMCR30P0CW71 290 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 FUT4P22083 530 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 HIST1H1TP22492 207 aaPredicted RBP13.31□□□□□ -0.28
VRK3-201ENST00000316763 CD40LGP29965 261 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 HOXD12P35452 270 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 PPP5CP53041 499 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 BNC1Q01954 994 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 TGM3Q08188 693 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 COX10Q12887 443 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SEC23BQ15437 767 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 NDUFA9Q16795 377 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 NLGN4XQ8N0W4 816 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SDR16C5Q8N3Y7 309 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 OR2L5Q8NG80 312 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 OR56A1Q8NGH5 318 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 MS4A6EQ96DS6 147 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 KLHL31Q9H511 634 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 FAM86C1Q9NVL1 165 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 IFT52Q9Y366 437 aa13.31□□□□□ -0.28
VRK3-201ENST00000316763 MYO15AQ9UKN7 3530 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 ARHGEF17Q96PE2 2063 aaPredicted RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 LOC100506127A0A0U1RQW1 187 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 FAM221BA6H8Z2 402 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 METTL15A6NJ78 407 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 PATE3B3GLJ2 98 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 TAF4O00268 1085 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 HAT1O14929 419 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 NME6O75414 186 aaPredicted RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 DBTP11182 482 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 ATP5A1P25705 553 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 TGFBR1P36897 503 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 TSFMP43897 325 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 SLC15A1P46059 708 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 PRKAG1P54619 331 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■■■■□ 20.3
VRK3-201ENST00000316763 ALDH6A1Q02252 535 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 TARDBPQ13148 414 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■■■■□ 23
VRK3-201ENST00000316763 KIR2DS3Q14952 304 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 MED22Q15528 200 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 TMEM201Q5SNT2 666 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 C12orf73Q69YU5 71 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 PGBD2Q6P3X8 592 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 ABHD17CQ6PCB6 329 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 RBM12BQ8IXT5 1001 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 ACOT4Q8N9L9 421 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 OR5D16Q8NGK9 328 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 FLVCR1-AS1Q8TAF5 88 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SUN3Q8TAQ9 357 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 ZDHHC1Q8WTX9 485 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 KLHL6Q8WZ60 621 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 UCN3Q969E3 161 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SLC22A18Q96BI1 424 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SARGQ9BW04 601 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 AICDAQ9GZX7 198 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SLC25A19Q9HC21 320 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SLC6A20Q9NP91 592 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 SNX7Q9UNH6 387 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 RPL36Q9Y3U8 105 aaKnown RBP13.3□□□□□ -0.28
VRK3-201ENST00000316763 ASB4Q9Y574 426 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 DNAH14Q0VDD8 3507 aa13.3□□□□□ -0.28
VRK3-201ENST00000316763 A0A0G2JPF8 293 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 SAGE2PA6NJ88 616 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 HNRNPCL3B7ZW38 293 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PPM1DO15297 605 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ENTPD6O75354 484 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CFIP05156 583 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 FHP07954 510 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 HNRNPCL4P0DMR1 293 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CSNK2A2P19784 350 aaPredicted RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 S100A5P33763 92 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 STXBP1P61764 594 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 PRR5P85299 388 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PRAMEF8Q5VWM4 474 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PRAMEF7Q5VXH5 474 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 MRM1Q6IN84 353 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 GKN2Q86XP6 184 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 RBM45Q8IUH3 476 aaKnown RBP13.29□□□□□ -0.28
VRK3-201ENST00000316763 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 OR8J1Q8NGP2 316 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 CEP76Q8TAP6 659 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 IL4I1Q96RQ9 567 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 MGLLQ99685 303 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 ERVMER34-1Q9H9K5 563 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 C3orf14Q9HBI5 128 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 FSCN3Q9NQT6 498 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 PRDM7Q9NQW5 492 aa13.29□□□□□ -0.28
VRK3-201ENST00000316763 SLC6A14Q9UN76 642 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms