RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 C19orf47Q8N9M1 422 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 VMP1Q96GC9 406 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 POLDIP3Q9BY77 421 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 ARMC7Q9H6L4 198 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 MAN2C1Q9NTJ4 1040 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 WDR45Q9Y484 360 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 A0A1W2PR77 199 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 H3BN98 237 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 M0R3G1 203 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 UBXN7O94888 489 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 PVRP15151 417 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 CDH3P22223 829 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 RACK1P63244 317 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 OCA2Q04671 838 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 ST3GAL4Q11206 333 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 BIKQ13323 160 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF542PQ5EBM4 170 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 FRRS1Q6ZNA5 592 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 COMTD1Q86VU5 262 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 SLC16A11Q8NCK7 471 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 SDF2Q99470 211 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 WFDC6Q9BQY6 131 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 KRCC1Q9NPI7 259 aaPredicted RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
VAMP2-201ENST00000316509 ZNF443Q9Y2A4 671 aaPredicted RBP13.03□□□□□ -0.32
VAMP2-201ENST00000316509 LAMA3Q16787 3333 aa13.02□□□□□ -0.32
VAMP2-201ENST00000316509 MDC1Q14676 2089 aaKnown RBP13.02□□□□□ -0.32
VAMP2-201ENST00000316509 IRGMA1A4Y4 181 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 HYKKA2RU49 373 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 COQ9O75208 318 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 STX11O75558 287 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 CD36P16671 472 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 NT5EP21589 574 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 FUT4P22083 530 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 MMP11P24347 488 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 STT3AP46977 705 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 SMSP52788 366 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 PDX1P52945 283 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 EMP3P54852 163 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 MAP4K2Q12851 820 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 BNIP3Q12983 259 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 TSPAN31Q12999 210 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 AQP6Q13520 282 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 C1orf61Q13536 156 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 SPCS2Q15005 226 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 ZSWIM7Q19AV6 140 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 PRTGQ2VWP7 1150 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 TYW3Q6IPR3 259 aaKnown RBP13.02□□□□□ -0.33
VAMP2-201ENST00000316509 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.33
VAMP2-201ENST00000316509 VRK2Q86Y07 508 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 ZNF619Q8N2I2 560 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 B3GNT7Q8NFL0 401 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 SLC9A6Q92581 669 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 DIO2Q92813 273 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 HOXB13Q92826 284 aaPredicted RBP13.02□□□□□ -0.33
VAMP2-201ENST00000316509 CDS1Q92903 461 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 CTHRC1Q96CG8 243 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
VAMP2-201ENST00000316509 ZNF350Q9GZX5 532 aa13.02□□□□□ -0.33
VAMP2-201ENST00000316509 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 SNTNA6NMZ2 147 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 TP53P04637 393 aaPredicted RBP13.01□□□□□ -0.33
VAMP2-201ENST00000316509 STSP08842 583 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 ACP2P11117 423 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 RPS4Y1P22090 263 aaKnown RBP13.01□□□□□ -0.33
VAMP2-201ENST00000316509 C21orf33P30042 268 aaPredicted RBP13.01□□□□□ -0.33
VAMP2-201ENST00000316509 MAP3K8P41279 467 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 STAT5AP42229 794 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 GIPRP48546 466 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 GSSP48637 474 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
VAMP2-201ENST00000316509 STARD6P59095 220 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 CDK5Q00535 292 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 DUSP5Q16690 384 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 TMEM236Q5W0B7 351 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 RASSF6Q6ZTQ3 369 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 DGLUCYQ7Z3D6 616 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 MRGPREQ86SM8 312 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 OR4N5Q8IXE1 308 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 ARL14Q8N4G2 192 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 ARHGEF39Q8N4T4 335 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 PIGXQ8TBF5 258 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 ACOT11Q8WXI4 607 aaPredicted RBP13.01□□□□□ -0.33
VAMP2-201ENST00000316509 RHNO1Q9BSD3 238 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
VAMP2-201ENST00000316509 RAB33BQ9H082 229 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms