RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 TCTN2Q96GX1 697 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 PRRC1Q96M27 445 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 AMBNQ9NP70 447 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 ZNF99A8MXY4 864 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 MAN1A2O60476 641 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 PLOD3O60568 738 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 CT62P0C5K7 136 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 MASP1P48740 699 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 PPM1FP49593 454 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 TMBIM6P55061 237 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 LSM11P83369 360 aaKnown RBP eCLIP17.16■□□□□ 0.347e-6■■■■□ 19.8
CCDC43-201ENST00000315286 ARHGAP11BQ3KRB8 267 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 TYW3Q6IPR3 259 aaKnown RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 CLIP4Q8N3C7 705 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 IPCEF1Q8WWN9 437 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-201ENST00000315286 ARHGDIGQ99819 225 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 DCUN1D5Q9BTE7 237 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 CCNB1IP1Q9NPC3 277 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 IMPAD1Q9NX62 359 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 MAT2BQ9NZL9 334 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 TMEM9Q9P0T7 183 aa17.16■□□□□ 0.34
CCDC43-201ENST00000315286 A0A087WV62 115 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 IGFBP1P08833 259 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-201ENST00000315286 OSMP13725 252 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 CTSKP43235 329 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 GFERP55789 205 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 TARDBPQ13148 414 aaKnown RBP eCLIP17.15■□□□□ 0.341e-6■■■■□ 23.1
CCDC43-201ENST00000315286 EXOSC7Q15024 291 aaKnown RBP17.15■□□□□ 0.34
CCDC43-201ENST00000315286 CCNJQ5T5M9 372 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 OGFOD3Q6PK18 319 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 TGM7Q96PF1 710 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 SIGLEC11Q96RL6 698 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 SDF2Q99470 211 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 RBCK1Q9BYM8 510 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 PIGUQ9H490 435 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 MTHFD2LQ9H903 347 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-201ENST00000315286 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 WARS2Q9UGM6 360 aaKnown RBP17.15■□□□□ 0.34
CCDC43-201ENST00000315286 SLC13A4Q9UKG4 626 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 WDR45Q9Y484 360 aa17.15■□□□□ 0.34
CCDC43-201ENST00000315286 FOXS1O43638 330 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 SOX14O95416 240 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 DCNP07585 359 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 PRKAR1BP31321 381 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CNR2P34972 360 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 UGT2B15P54855 530 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 SRSF5Q13243 272 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 ILKQ13418 452 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 INAVAQ3KP66 663 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 EXOSC6Q5RKV6 272 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 DGAT2L6Q6ZPD8 337 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 PRSS48Q7RTY5 328 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 RORBQ92753 470 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 PSORS1C1Q9UIG5 152 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 A0A1W2PPW3 197 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 TRIM64BA6NI03 449 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 MRPS14O60783 128 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 FADS2O95864 444 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CXCL12P48061 93 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 NUDT6P53370 316 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CDC42P60953 191 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 ZP2Q05996 745 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 PUS10Q3MIT2 529 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 NKAIN2Q5VXU1 208 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 DHRS4L2Q6PKH6 230 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CCDC81Q6ZN84 652 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 ZER1Q7Z7L7 766 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 MORN4Q8NDC4 146 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 OR4K5Q8NGD3 323 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF675Q8TD23 568 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 FKBP10Q96AY3 582 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CTHRC1Q96CG8 243 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 FUNDC2Q9BWH2 189 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 POLR2J3Q9H1A7 115 aaKnown RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 HCN3Q9P1Z3 774 aa17.14■□□□□ 0.33
CCDC43-201ENST00000315286 TP53BP1Q12888 1972 aaPredicted RBP17.14■□□□□ 0.33
CCDC43-201ENST00000315286 CABIN1Q9Y6J0 2220 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 CLDN24A6NM45 220 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 K7ESF4 209 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 NOL3O60936 208 aaKnown RBP17.13■□□□□ 0.33
CCDC43-201ENST00000315286 ALOX5P09917 674 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 ACVR2AP27037 513 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 AVPR1BP47901 424 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 GABRA4P48169 554 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 TAS2R41P59536 307 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 HOXC5Q00444 222 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 DMWDQ09019 674 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 C14orf28Q4W4Y0 310 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 DNASE2BQ8WZ79 361 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 PIK3R3Q92569 461 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 GGHQ92820 318 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 COPS4Q9BT78 406 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 ACOT13Q9NPJ3 140 aa17.13■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF443Q9Y2A4 671 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-201ENST00000315286 CENPVL1A0A0U1RR11 272 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 PIAS2O75928 621 aa17.12■□□□□ 0.33
CCDC43-201ENST00000315286 SLITRK5O94991 958 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms