RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 CA5BP1Q8WTZ4 195 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 SARAFQ96BY9 339 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 TMEM41AQ96HV5 264 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 METTL2AQ96IZ6 378 aaKnown RBP14.91□□□□□ -0.02
LSM1-201ENST00000311351 UBQLN3Q9H347 655 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 ACKR4Q9NPB9 350 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 TAS2R7Q9NYW3 318 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 COQ3Q9NZJ6 369 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 KLRF1Q9NZS2 232 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 MAPRE3Q9UPY8 281 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 TRAF6Q9Y4K3 522 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 FBN2P35556 2912 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 INTS1Q8N201 2190 aaKnown RBP14.91□□□□□ -0.02
LSM1-201ENST00000311351 APCP25054 2843 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 FAM90A27PA6NNH2 459 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 RGS16O15492 202 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 PDPK1O15530 556 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 COQ9O75208 318 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 TRAPPC6AO75865 159 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 PTPN6P29350 595 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 CDK9P50750 372 aaKnown RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 PMPCAQ10713 525 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 HSPB3Q12988 150 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 TOMM20Q15388 145 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 EIPR1Q53HC9 387 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 WLSQ5T9L3 541 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 CES4AQ5XG92 561 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 TMEM211Q6ICI0 200 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 ZNF551Q7Z340 670 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 WDR53Q7Z5U6 358 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 SLC44A2Q8IWA5 706 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 CLYBLQ8N0X4 340 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 RND1Q92730 232 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 CIDECQ96AQ7 238 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 EFHD2Q96C19 240 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 COL21A1Q96P44 957 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 ADOQ96SZ5 270 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 STMN4Q9H169 189 aaPredicted RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 EML4Q9HC35 981 aaKnown RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 CHST11Q9NPF2 352 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 DDX18Q9NVP1 670 aaKnown RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 TAS2R9Q9NYW1 312 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 BAIAP2L1Q9UHR4 511 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 WBP11Q9Y2W2 641 aaKnown RBP14.9□□□□□ -0.02
LSM1-201ENST00000311351 SLC6A5Q9Y345 797 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 KIAA1549Q9HCM3 1950 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 HCFC1P51610 2035 aa14.9□□□□□ -0.02
LSM1-201ENST00000311351 A0A087WV62 115 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 C15orf38-AP3S2A0A0A6YYH1 394 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 OR6C70A6NIJ9 312 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 UPK1AO00322 258 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 SNPHO15079 494 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 TSPAN2O60636 221 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 ICOSLGO75144 302 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 LYPLA1O75608 230 aaPredicted RBP14.89□□□□□ -0.03
LSM1-201ENST00000311351 PSMG1O95456 288 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 HPNP05981 417 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 FGF4P08620 206 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 KIR3DL1P43629 444 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 PSG6Q00889 435 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 CRYZQ08257 329 aaKnown RBP14.89□□□□□ -0.03
LSM1-201ENST00000311351 XKR7Q5GH72 579 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 C1orf185Q5T7R7 199 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 TIGD3Q6B0B8 471 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 SLC30A6Q6NXT4 461 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 TMEM81Q6P7N7 255 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 B3GNT6Q6ZMB0 384 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 LARP4Q71RC2 724 aaKnown RBP eCLIP14.89□□□□□ -0.03
LSM1-201ENST00000311351 OR2L13Q8N349 312 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 OR6Y1Q8NGX8 325 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 SLC35A4Q96G79 324 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 TTYH2Q9BSA4 534 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 CENPHQ9H3R5 247 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 REEP4Q9H6H4 257 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 SERHLQ9NQF3 203 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 ALKBH4Q9NXW9 302 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 ZDHHC2Q9UIJ5 367 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 C19orf53Q9UNZ5 99 aaPredicted RBP14.89□□□□□ -0.03
LSM1-201ENST00000311351 OR10H1Q9Y4A9 318 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 DCHS2Q6V1P9 2916 aa14.89□□□□□ -0.03
LSM1-201ENST00000311351 WDR91A4D1P6 747 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 NKX2-6A6NCS4 301 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 C17orf51A8MQB3 221 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 PLOD2O00469 737 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 WDR1O75083 606 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 GLI4P10075 376 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 BCKDHAP12694 445 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 COX6B1P14854 86 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 EFNA1P20827 205 aaPredicted RBP14.88□□□□□ -0.03
LSM1-201ENST00000311351 ELAVL4P26378 380 aaKnown RBP14.88□□□□□ -0.03
LSM1-201ENST00000311351 IL12BP29460 328 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 CHRNB4P30926 498 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 KRT20P35900 424 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 SERPINB5P36952 375 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 SERPINB4P48594 390 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 WIPI1Q5MNZ9 446 aaPredicted RBP14.88□□□□□ -0.03
LSM1-201ENST00000311351 CEP85LQ5SZL2 805 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 DCST1Q5T197 706 aa14.88□□□□□ -0.03
LSM1-201ENST00000311351 ACAD11Q709F0 780 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms