RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
USP38-201ENST00000307017 A0A1W2PQ45 241 aaPredicted RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 A0A1W2PQY0 241 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 FANCGO15287 622 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 IGFBP1P08833 259 aaPredicted RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 HOXB5P09067 269 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 MAGEB1P43366 347 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 HTR6P50406 440 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 RAB11BQ15907 218 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 NDUFAF5Q5TEU4 345 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 NIPA2Q8N8Q9 360 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 OR56B2PQ8NGI1 322 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 FNDC8Q8TC99 324 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 TGIF2Q9GZN2 237 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CHST11Q9NPF2 352 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 B3GNT2Q9NY97 397 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 PCDHGA1Q9Y5H4 931 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 FUOMA2VDF0 154 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 MSCO60682 206 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 PTAFRP25105 342 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 PDZD9Q8IXQ8 264 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 OR8J2Q8NGG1 315 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 TMEM184CQ9NVA4 438 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 SDHBP21912 280 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 GPR149Q86SP6 731 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 ZNF619Q8N2I2 560 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 RBM24Q9BX46 236 aaKnown RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 SLC6A16Q9GZN6 736 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 QRSL1Q9H0R6 528 aaKnown RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 LILRB5O75023 590 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 GSRP00390 522 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 EBLN1P0CF75 366 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CALCBP10092 127 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 SERPINA2P20848 420 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 GSTM2P28161 218 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 SLC9A3R2Q15599 337 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 IL17RDQ8NFM7 739 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 OR56A1Q8NGH5 318 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 TYROBPO43914 113 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CERS1P27544 350 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CD79BP40259 229 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 RAB28P51157 221 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 PLEKHS1Q5SXH7 462 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 UGT2A3Q6UWM9 527 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
USP38-201ENST00000307017 OR5AK2Q8NH90 309 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 MALSU1Q96EH3 234 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 SEZ6LQ9BYH1 1024 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 SGK494L7N484 410 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CTXN1P60606 82 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 CCNJQ5T5M9 372 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 TMEM125Q96AQ2 219 aa12.01□□□□□ -0.49
USP38-201ENST00000307017 MPPED1O15442 326 aa12□□□□□ -0.49
USP38-201ENST00000307017 FGF19O95750 216 aa12□□□□□ -0.49
USP38-201ENST00000307017 ZNF888P0CJ79 500 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 GIFP27352 417 aa12□□□□□ -0.49
USP38-201ENST00000307017 CX3CR1P49238 355 aa12□□□□□ -0.49
USP38-201ENST00000307017 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 TECRLQ5HYJ1 363 aa12□□□□□ -0.49
USP38-201ENST00000307017 C12orf40Q86WS4 652 aa12□□□□□ -0.49
USP38-201ENST00000307017 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
USP38-201ENST00000307017 SLC7A11Q9UPY5 501 aa12□□□□□ -0.49
USP38-201ENST00000307017 PLSCR1O15162 318 aa12□□□□□ -0.49
USP38-201ENST00000307017 SLC22A5O76082 557 aa12□□□□□ -0.49
USP38-201ENST00000307017 PRDX3P30048 256 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 ART1P52961 327 aa12□□□□□ -0.49
USP38-201ENST00000307017 ATPAF1Q5TC12 328 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 OR5W2Q8NH69 310 aa12□□□□□ -0.49
USP38-201ENST00000307017 ZNF175Q9Y473 711 aa12□□□□□ -0.49
USP38-201ENST00000307017 PCDHGA2Q9Y5H1 932 aa12□□□□□ -0.49
USP38-201ENST00000307017 IGHV3-64DA0A0J9YX35 117 aa12□□□□□ -0.49
USP38-201ENST00000307017 MPIG6BO95866 241 aa12□□□□□ -0.49
USP38-201ENST00000307017 LAMP1P11279 417 aa12□□□□□ -0.49
USP38-201ENST00000307017 FBLP22087 321 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 CA5AP35218 305 aa12□□□□□ -0.49
USP38-201ENST00000307017 AFF3P51826 1226 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 EMP3P54852 163 aa12□□□□□ -0.49
USP38-201ENST00000307017 NFATC3Q12968 1075 aa12□□□□□ -0.49
USP38-201ENST00000307017 SNTA1Q13424 505 aa12□□□□□ -0.49
USP38-201ENST00000307017 AKR1C8PQ5T2L2 129 aa12□□□□□ -0.49
USP38-201ENST00000307017 FAM198BQ6UWH4 519 aa12□□□□□ -0.49
USP38-201ENST00000307017 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 SLC41A3Q96GZ6 507 aa12□□□□□ -0.49
USP38-201ENST00000307017 CDC6Q99741 560 aa12□□□□□ -0.49
USP38-201ENST00000307017 CACNG6Q9BXT2 260 aa12□□□□□ -0.49
USP38-201ENST00000307017 GPR88Q9GZN0 384 aa12□□□□□ -0.49
USP38-201ENST00000307017 DMAC2Q9NW81 257 aa12□□□□□ -0.49
USP38-201ENST00000307017 HSFX1Q9UBD0 423 aa12□□□□□ -0.49
USP38-201ENST00000307017 SLC35E2BP0CK96 405 aa12□□□□□ -0.49
USP38-201ENST00000307017 PITPNBP48739 271 aa12□□□□□ -0.49
USP38-201ENST00000307017 CNN2Q99439 309 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 F5H5P2 479 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms