RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TECRLQ5HYJ1 363 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
ABCA3-201ENST00000301732 TTLQ8NG68 377 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 OR52N2Q8NGI0 321 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 MALSU1Q96EH3 234 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 SHC2P98077 582 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 RAB11BQ15907 218 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 GPR33Q49SQ1 333 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 TMEM205Q6UW68 189 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 FBXW12Q6X9E4 464 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 MRPL41Q8IXM3 137 aaKnown RBP11.75□□□□□ -0.53
ABCA3-201ENST00000301732 KCNN1Q92952 543 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 PCDHGB2Q9Y5G2 931 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 COL1A2P08123 1366 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 PPP6CO00743 305 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 CDK1P06493 297 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 RPS10P46783 165 aaKnown RBP11.75□□□□□ -0.53
ABCA3-201ENST00000301732 SNTA1Q13424 505 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 SEC22AQ96IW7 307 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 NTMT1Q9BV86 223 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 PCDHGA2Q9Y5H1 932 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 MTNR1AP48039 350 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 RELAQ04206 551 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 DOC2AQ14183 400 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 OR8J2Q8NGG1 315 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 TMEM19Q96HH6 336 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 FZD8Q9H461 694 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 CRTAC1Q9NQ79 661 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 NLE1Q9NVX2 485 aaPredicted RBP11.75□□□□□ -0.53
ABCA3-201ENST00000301732 TMEM59LQ9UK28 342 aa11.75□□□□□ -0.53
ABCA3-201ENST00000301732 BCL9O00512 1426 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 TPRG1Q6ZUI0 275 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SLC22A17Q8WUG5 538 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 PAPOLGQ9BWT3 736 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 GPR174Q9BXC1 333 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SLC7A11Q9UPY5 501 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 RAB19A4D1S5 217 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CDC14CA4D256 554 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 F5H5P2 479 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 DBHP09172 617 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CTXN1P60606 82 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 PLCXD2Q0VAA5 305 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SLC9A3R2Q15599 337 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 WDR45BQ5MNZ6 344 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ADGRF3Q8IZF5 1079 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SYNPRQ8TBG9 265 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ZUFSPQ96AP4 578 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 IGLON5A6NGN9 336 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 LEFTY2O00292 366 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 KDELR3O43731 214 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 PRDX3P30048 256 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 RIDAP52758 137 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 DBPQ10586 325 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 NLRP8Q86W28 1048 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 NUDT22Q9BRQ3 303 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 DPH7Q9BTV6 452 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 FBXL2Q9UKC9 423 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 A0A096LPI6 279 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CHRNB1P11230 501 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 RFC2P35250 354 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 FADDQ13158 208 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SPCS2Q15005 226 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CNOT9Q92600 299 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 SLC22A18Q96BI1 424 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CDC6Q99741 560 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 VRK1Q99986 396 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 RBM24Q9BX46 236 aaKnown RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 MED20Q9H944 212 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 NMNAT1Q9HAN9 279 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 RDH14Q9HBH5 336 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 HIF1ANQ9NWT6 349 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ACSL5Q9ULC5 683 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 GGT3PA6NGU5 568 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 E9PI62 339 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 COCHO43405 550 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 AGTR1P30556 359 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 TAS2R43P59537 309 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CPOQ8IVL8 374 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ZNF420Q8TAQ5 688 aaPredicted RBP11.74□□□□□ -0.53
ABCA3-201ENST00000301732 NT5C3BQ969T7 300 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 ZNF681Q96N22 645 aa11.74□□□□□ -0.53
ABCA3-201ENST00000301732 CNN2Q99439 309 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms