RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TBX6O95947 436 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 HBQ1P09105 142 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 BSGP35613 385 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ATP6V1E1P36543 226 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF79Q15937 498 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 NDUFAF5Q5TEU4 345 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ARSKQ6UWY0 536 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 NUDT13Q86X67 352 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 KRT73Q86Y46 540 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 OR6T1Q8NGN1 323 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 SETD7Q8WTS6 366 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 SMAD5Q99717 465 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 MS4A8Q9BY19 250 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 OR52A5Q9H2C5 316 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 EGLN3Q9H6Z9 239 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 MAFFQ9ULX9 164 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 A0A1W2PS29 197 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 NDUFS4O43181 175 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RPL35P42766 123 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 LIMS1P48059 325 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RORCP51449 518 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF234Q14588 700 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 FAM46CQ5VWP2 391 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF770Q6IQ21 691 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 TRIM69Q86WT6 500 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RGMAQ96B86 450 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 C16orf58Q96GQ5 468 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 DIRAS2Q96HU8 199 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF514Q96K75 400 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF354BQ96LW1 612 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 BARHL1Q9BZE3 327 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 KLHL31Q9H511 634 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 CNOT2Q9NZN8 540 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 EIF3KQ9UBQ5 218 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ARPC4-TTLL3A0A0A6YYG9 625 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 HEPACAM2A8MVW5 462 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ERI3O43414 337 aaKnown RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PAPLNO95428 1278 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ADH1CP00326 375 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CISD3P0C7P0 127 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CD72P21854 359 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 MMP11P24347 488 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 HYAL2Q12891 473 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 GARNL3Q5VVW2 1013 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SAXO2Q658L1 398 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 RSPRY1Q96DX4 576 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 RACGAP1Q9H0H5 632 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 GLIPR2Q9H4G4 154 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CNIH4Q9P003 139 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF222Q9UK12 451 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 NUP50Q9UKX7 468 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CEP290O15078 2479 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TRBV23OR9-2A0A075B6M9 112 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 B4DXG7 233 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 FAAHO00519 579 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 RB1P06400 928 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 MYL12AP19105 171 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 KIR2DL3P43628 341 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 KCNJ5P48544 419 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 GZMKP49863 264 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ILKQ13418 452 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 MFSD13AQ14CX5 517 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CRTC2Q53ET0 693 aaPredicted RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 LCTLQ6UWM7 567 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 IKBIPQ70UQ0 350 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ERN2Q76MJ5 926 aaKnown RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ZER1Q7Z7L7 766 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 CCDC190Q86UF4 302 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PDZD3Q86UT5 571 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 LRRTM4Q86VH4 590 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TTLQ8NG68 377 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SERHL2Q9H4I8 314 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 NEUROD4Q9HD90 331 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SLC9A8Q9Y2E8 581 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PLEKHM1Q9Y4G2 1056 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 COL4A6Q14031 1691 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 HEATR5BQ9P2D3 2071 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TSPAN11A1L157 253 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PGRMC2O15173 223 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SIGLEC5O15389 551 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SCG5P05408 212 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ITGB7P26010 798 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TIE1P35590 1138 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 AVPR1BP47901 424 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms