RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 METTL27Q8N6F8 245 aaPredicted RBP14.52□□□□□ -0.08
LSM6-201ENST00000296581 SLC16A11Q8NCK7 471 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 OR51Q1Q8NH59 317 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 SPATA5L1Q9BVQ7 753 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 AMBRA1Q9C0C7 1298 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 ARMC7Q9H6L4 198 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 CALML5Q9NZT1 146 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 SEC14L3Q9UDX4 400 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 SAMHD1Q9Y3Z3 626 aaKnown RBP14.52□□□□□ -0.08
LSM6-201ENST00000296581 PCDHGB5Q9Y5G0 923 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 PCDHGB3Q9Y5G1 929 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 ENPP4Q9Y6X5 453 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 ADAMDEC1O15204 470 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
LSM6-201ENST00000296581 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 RPLP0P05388 317 aaKnown RBP14.52□□□□□ -0.09
LSM6-201ENST00000296581 ZNF12P17014 697 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 AVPR2P30518 371 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 CAPGP40121 348 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 NR1H2P55055 460 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 ADARB1P78563 741 aaKnown RBP14.52□□□□□ -0.09
LSM6-201ENST00000296581 PROX2Q3B8N5 592 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 CYP27C1Q4G0S4 372 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 ATAD3BQ5T9A4 648 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 ZCCHC12Q6PEW1 402 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 TTLL10Q6ZVT0 673 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 GPR135Q8IZ08 494 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 OR4D9Q8NGE8 314 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 BARD1Q99728 777 aaKnown RBP14.52□□□□□ -0.09
LSM6-201ENST00000296581 LRRN3Q9H3W5 708 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 EXD2Q9NVH0 621 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 SERTAD3Q9UJW9 196 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 N6AMT1Q9Y5N5 214 aa14.52□□□□□ -0.09
LSM6-201ENST00000296581 H0YAE9 185 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 H6PDO95479 791 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 ACP2P11117 423 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 CKMT1AP12532 417 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 PRKACGP22612 351 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 RRM2P31350 389 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 STX4Q12846 297 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 EPS8Q12929 822 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 GPAT3Q53EU6 434 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 ANKRD34AQ69YU3 496 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 DGAT2L6Q6ZPD8 337 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 OLIG3Q7RTU3 272 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 PROX1Q92786 737 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 ZNF354BQ96LW1 612 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 DPYSL5Q9BPU6 564 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 SLC38A1Q9H2H9 487 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 PIGUQ9H490 435 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 LIN28AQ9H9Z2 209 aaKnown RBP14.51□□□□□ -0.09
LSM6-201ENST00000296581 CXorf21Q9HAI6 301 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 FGF21Q9NSA1 209 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 TMEFF2Q9UIK5 374 aaPredicted RBP14.51□□□□□ -0.09
LSM6-201ENST00000296581 CARD8Q9Y2G2 431 aa14.51□□□□□ -0.09
LSM6-201ENST00000296581 OR10H2O60403 315 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 IFNW1P05000 195 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 MYF6P23409 242 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 MAP3K8P41279 467 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 BTG2P78543 158 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 MYBPC1Q00872 1141 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 ERV3-1Q14264 604 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 DUSP5Q16690 384 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 USP51Q70EK9 711 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 C16orf62Q7Z3J2 963 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 WDR53Q7Z5U6 358 aaPredicted RBP14.5□□□□□ -0.09
LSM6-201ENST00000296581 ZNF605Q86T29 641 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 CDRT4Q8N9R6 151 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 DOK4Q8TEW6 326 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 HOXB13Q92826 284 aaPredicted RBP14.5□□□□□ -0.09
LSM6-201ENST00000296581 CDS1Q92903 461 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 PIP5K1AQ99755 562 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 NDC1Q9BTX1 674 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 ALOXE3Q9BYJ1 711 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 ADAP2Q9NPF8 381 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 GMEB2Q9UKD1 530 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 CDC14AQ9UNH5 594 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 LYVE1Q9Y5Y7 322 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 FAM47E-STBD1D6RA91 191 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 DSCR3O14972 297 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 HYAL3O43820 417 aaPredicted RBP14.5□□□□□ -0.09
LSM6-201ENST00000296581 CNOT3O75175 753 aaKnown RBP14.5□□□□□ -0.09
LSM6-201ENST00000296581 CBX7O95931 251 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 ALBP02768 609 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 RHCEP18577 417 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 S1PR1P21453 382 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 LPAL2Q16609 132 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 ARHGAP11BQ3KRB8 267 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 FAM209AQ5JX71 171 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 GALNT12Q8IXK2 581 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 VWA5B2Q8N398 1253 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 OR4C15Q8NGM1 316 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 CYGBQ8WWM9 190 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 SLC9A6Q92581 669 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 STACQ99469 402 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 FANCEQ9HB96 536 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 LANCL2Q9NS86 450 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 RABL2BQ9UNT1 228 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 TESMINQ9Y4I5 508 aa14.5□□□□□ -0.09
LSM6-201ENST00000296581 MAU2Q9Y6X3 613 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms