RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 VAPAQ9P0L0 249 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 TJP1Q07157 1748 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 TRAV6A0A075B6T7 132 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 SLC35F4A4IF30 521 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 RAD51DO75771 328 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CSF2P04141 144 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 RAB3BP20337 219 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 GGT2P36268 569 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 AFF1P51825 1210 aaKnown RBP12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ART1P52961 327 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 TDGQ13569 410 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CHRFAM7AQ494W8 412 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 IER5LQ5T953 404 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ADAMTS16Q8TE57 1224 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 FRS2Q8WU20 508 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 PEX11GQ96HA9 241 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 OR2B2Q9GZK3 357 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CWH43Q9H720 699 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 FZD3Q9NPG1 666 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 MLXQ9UH92 298 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 SMIM30A4D0T7 59 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CTBP2P56545 445 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 WNT4P56705 351 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 SGCAQ16586 387 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 UAP1L1Q3KQV9 507 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ZER1Q7Z7L7 766 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CLEC14AQ86T13 490 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 FAM46BQ96A09 425 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 UBXN10Q96LJ8 280 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 OR4K3Q96R72 315 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 OR6C2Q9NZP2 312 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ADAM29Q9UKF5 820 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 C17orf113A0A1B0GUU1 675 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SCGB1D2O95969 90 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CD8BP10966 210 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CCR7P32248 378 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CDKN2CP42773 168 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ACY1Q03154 408 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ZC3H14Q6PJT7 736 aaKnown RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 TTLL10Q6ZVT0 673 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PRRC1Q96M27 445 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ABCG2Q9UNQ0 655 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SOCS7O14512 581 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PRLP01236 227 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 UBL4AP11441 157 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CDK3Q00526 305 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 FGL1Q08830 312 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 FAM76BQ5HYJ3 339 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SLC22A10Q63ZE4 541 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CBLL1Q75N03 491 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 OR4N5Q8IXE1 308 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 GATA6Q92908 595 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 NT5C3BQ969T7 300 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PGAM5Q96HS1 289 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 FMO6PO60774 539 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 IL1RNP18510 177 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SELENOVP59797 346 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 NTHL1P78549 312 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ITPKCQ96DU7 683 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 WDR77Q9BQA1 342 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 TTTY10Q9BZA0 68 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CPNE5Q9HCH3 593 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 A6NHS1 94 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 GJE1A6NN92 205 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 FOXE1O00358 373 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 MMP2P08253 660 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CEBPBP17676 345 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PTNP21246 168 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ACVR1BP36896 505 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SNTB2Q13425 540 aaKnown RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 BTBD16Q32M84 506 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PLBD1Q6P4A8 553 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 OR8K3Q8NH51 312 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CREB3L4Q8TEY5 395 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 HOXB13Q92826 284 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CD93Q9NPY3 652 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 KAT6AQ92794 2004 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 C1orf105O95561 183 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CD3GP09693 182 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 IL7P13232 177 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 ALG10Q5BKT4 473 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 PLAG1Q6DJT9 500 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 LEG1Q6P5S2 330 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms