RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ARRDC2Q8TBH0 407 aa2.54□□□□□ -2
CHD1-201ENST00000284049 LARP4BQ92615 738 aaKnown RBP2.54□□□□□ -2
CHD1-201ENST00000284049 KIFAP3Q92845 792 aa2.54□□□□□ -2
CHD1-201ENST00000284049 RIT2Q99578 217 aa2.54□□□□□ -2
CHD1-201ENST00000284049 MFFQ9GZY8 342 aa2.54□□□□□ -2
CHD1-201ENST00000284049 PIGUQ9H490 435 aa2.54□□□□□ -2
CHD1-201ENST00000284049 IL26Q9NPH9 171 aa2.54□□□□□ -2
CHD1-201ENST00000284049 PSORS1C1Q9UIG5 152 aa2.54□□□□□ -2
CHD1-201ENST00000284049 PRPF19Q9UMS4 504 aaKnown RBP2.54□□□□□ -2
CHD1-201ENST00000284049 KCTD3Q9Y597 815 aa2.54□□□□□ -2
CHD1-201ENST00000284049 COL4A1P02462 1669 aa2.54□□□□□ -2
CHD1-201ENST00000284049 TNRC6CQ9HCJ0 1690 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 LRRIQ3A6PVS8 624 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 FBP2O00757 339 aa2.53□□□□□ -2
CHD1-201ENST00000284049 BCKDKO14874 412 aa2.53□□□□□ -2
CHD1-201ENST00000284049 NEURL1O76050 574 aa2.53□□□□□ -2
CHD1-201ENST00000284049 GP9P14770 177 aa2.53□□□□□ -2
CHD1-201ENST00000284049 FCGR2BP31994 310 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 ARR3P36575 388 aa2.53□□□□□ -2
CHD1-201ENST00000284049 LEPRP48357 1165 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 CNTN1Q12860 1018 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SPHARQ15513 63 aa2.53□□□□□ -2
CHD1-201ENST00000284049 KIAA1755Q5JYT7 1200 aa2.53□□□□□ -2
CHD1-201ENST00000284049 OR2A2Q6IF42 318 aa2.53□□□□□ -2
CHD1-201ENST00000284049 OR7E24Q6IFN5 339 aa2.53□□□□□ -2
CHD1-201ENST00000284049 LEKR1Q6ZMV7 388 aa2.53□□□□□ -2
CHD1-201ENST00000284049 FCRLAQ7L513 359 aa2.53□□□□□ -2
CHD1-201ENST00000284049 RBFAQ8N0V3 343 aa2.53□□□□□ -2
CHD1-201ENST00000284049 CHDHQ8NE62 594 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 NXPE2Q96DL1 559 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TIMD4Q96H15 378 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TAAR6Q96RI8 345 aa2.53□□□□□ -2
CHD1-201ENST00000284049 KRCC1Q9NPI7 259 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 PHPT1Q9NRX4 125 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 HIF1ANQ9NWT6 349 aa2.53□□□□□ -2
CHD1-201ENST00000284049 STX18Q9P2W9 335 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 ONECUT1Q9UBC0 465 aa2.53□□□□□ -2
CHD1-201ENST00000284049 PDS5AQ29RF7 1337 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 PRR32B1ATL7 298 aa2.53□□□□□ -2
CHD1-201ENST00000284049 C17orf105B2RV13 164 aa2.53□□□□□ -2
CHD1-201ENST00000284049 POC1B-GALNT4F8VUJ3 575 aa2.53□□□□□ -2
CHD1-201ENST00000284049 NIPSNAP2O75323 286 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ARHGEF15O94989 841 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ATP5C1P36542 298 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 CDX1P47902 265 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 HTR6P50406 440 aa2.53□□□□□ -2
CHD1-201ENST00000284049 RPS15P62841 145 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 ENPEPQ07075 957 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SYPL1Q16563 259 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ZNF776Q68DI1 518 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 LRRC31Q6UY01 552 aa2.53□□□□□ -2
CHD1-201ENST00000284049 CEACAM20Q6UY09 585 aa2.53□□□□□ -2
CHD1-201ENST00000284049 APTXQ7Z2E3 356 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 YRDCQ86U90 279 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 ERO1BQ86YB8 467 aa2.53□□□□□ -2
CHD1-201ENST00000284049 CLEC4FQ8N1N0 589 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TRPV1Q8NER1 839 aa2.53□□□□□ -2
CHD1-201ENST00000284049 OR4L1Q8NH43 312 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SUSD6Q92537 303 aa2.53□□□□□ -2
CHD1-201ENST00000284049 VIPAS39Q9H9C1 493 aa2.53□□□□□ -2
CHD1-201ENST00000284049 APMAPQ9HDC9 416 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SEC14L4Q9UDX3 406 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ING1Q9UK53 422 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 MGAT4AQ9UM21 535 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ZFR2Q9UPR6 939 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 SATB2Q9UPW6 733 aa2.53□□□□□ -2
CHD1-201ENST00000284049 MAST3O60307 1309 aa2.53□□□□□ -2
CHD1-201ENST00000284049 E9PMD0 336 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ZNHIT1O43257 154 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SH3BGRLO75368 114 aa2.53□□□□□ -2
CHD1-201ENST00000284049 JTBO76095 146 aa2.53□□□□□ -2
CHD1-201ENST00000284049 PET100P0DJ07 73 aa2.53□□□□□ -2
CHD1-201ENST00000284049 HSD17B1P14061 328 aa2.53□□□□□ -2
CHD1-201ENST00000284049 APOBEC1P41238 236 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 MAZP56270 477 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 MYL7Q01449 175 aa2.53□□□□□ -2
CHD1-201ENST00000284049 GCKRQ14397 625 aa2.53□□□□□ -2
CHD1-201ENST00000284049 GRB14Q14449 540 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TSC22D1Q15714 1073 aa2.53□□□□□ -2
CHD1-201ENST00000284049 KLHL38Q2WGJ6 581 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SLC24A5Q71RS6 500 aa2.53□□□□□ -2
CHD1-201ENST00000284049 MRPL10Q7Z7H8 261 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 RNF10Q8N5U6 811 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 NEU4Q8WWR8 484 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 C10orf35Q96D05 121 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ITCHQ96J02 903 aa2.53□□□□□ -2
CHD1-201ENST00000284049 LPAR2Q9HBW0 351 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ACKR4Q9NPB9 350 aa2.53□□□□□ -2
CHD1-201ENST00000284049 FZD3Q9NPG1 666 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ZDHHC2Q9UIJ5 367 aa2.53□□□□□ -2
CHD1-201ENST00000284049 SELENOKQ9Y6D0 94 aa2.53□□□□□ -2
CHD1-201ENST00000284049 DOCK2Q92608 1830 aa2.53□□□□□ -2
CHD1-201ENST00000284049 DICER1Q9UPY3 1922 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 PTGESO14684 152 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ENSAO43768 121 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 SLC19A2O60779 497 aa2.53□□□□□ -2
CHD1-201ENST00000284049 OPN1LWP04000 364 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ACP2P11117 423 aa2.53□□□□□ -2
CHD1-201ENST00000284049 FOLR3P41439 243 aa2.53□□□□□ -2
CHD1-201ENST00000284049 DGCR6Q14129 220 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms