RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PDE7BQ9NP56 450 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 GPR83Q9NYM4 423 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 KCTD3Q9Y597 815 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RAB3BP20337 219 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 HTR3AP46098 478 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 VSX2P58304 361 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 RRAS2P62070 204 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DGKZQ13574 1117 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 KRBOX4Q5JUW0 171 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF529Q6P280 563 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 DNAAF1Q8NEP3 725 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 LIN37Q96GY3 246 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-201ENST00000273317 WDR92Q96MX6 357 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 PLAGL1Q9UM63 463 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 LRP6O75581 1613 aa7.6□□□□□ -1.19
LIMD1-201ENST00000273317 A0A0U1RQF3 1178 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 CERS1P27544 350 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 RABGGTBP53611 331 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 GPM6BQ13491 265 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SF3A2Q15428 464 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 RAB30Q15771 203 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 LRRC37A5PQ49AS3 106 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 UNC50Q53HI1 259 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SLC39A4Q6P5W5 647 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SMAP2Q8WU79 429 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 IRF7Q92985 503 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 OR51J1Q9H342 316 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 EBF1Q9UH73 591 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF541Q9H0D2 1346 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 GDF5P43026 501 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 GALK2Q01415 458 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM225Q6GV28 225 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 CD99L2Q8TCZ2 262 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF436Q9C0F3 470 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 LIN28AQ9H9Z2 209 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 IRS2Q9Y4H2 1338 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 LYRM1O43325 122 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 MTX2O75431 263 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ATE1O95260 518 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 HBQ1P09105 142 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 IRF2P14316 349 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM115Q12893 351 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TLDC1Q6P9B6 456 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM107Q6UX40 140 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 C6orf120Q7Z4R8 191 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SORCS1Q8WY21 1168 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF334Q9HCZ1 680 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SLC6A5Q9Y345 797 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 KIF13BQ9NQT8 1826 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 C8orf89P0DMQ9 161 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SOX2P48431 317 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 WNT4P56705 351 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 UEVLDQ8IX04 471 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SMOQ99835 787 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 C11orf49Q9H6J7 331 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 HMX3A6NHT5 357 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 INHAP05111 366 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ERVK-16P61578 105 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 CES4AQ5XG92 561 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 OR10Q1Q8NGQ4 319 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TBC1D15Q8TC07 691 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TBC1D20Q96BZ9 403 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 PPA2Q9H2U2 334 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 AGPAT4Q9NRZ5 378 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 FAM186AA6NE01 2351 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 A0A0A6YYH2 397 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 A6NJ64 397 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 KCNQ1P51787 676 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 UBXN2BQ14CS0 331 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 PCBP2Q15366 365 aaKnown RBP eCLIP7.59□□□□□ -1.191e-7■■■□□ 14.9
LIMD1-201ENST00000273317 SGCAQ16586 387 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TXNDC8Q6A555 127 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 PLAG1Q6DJT9 500 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 CNIH2Q6PI25 160 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 OTOP2Q7RTS6 562 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 METTL2AQ96IZ6 378 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TMEM98Q9Y2Y6 226 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF674Q2M3X9 581 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ZNF461Q8TAF7 563 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ABHD5Q8WTS1 349 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 DDX1Q92499 740 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 BTF3L4Q96K17 158 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TWNKQ96RR1 684 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 LPLP06858 475 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 BDKRB2P30411 391 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 GDI1P31150 447 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 PBX2P40425 430 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ELAVL3Q14576 367 aaKnown RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 C1orf94Q6P1W5 598 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 TREML1Q86YW5 311 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 GPR137CQ8N3F9 429 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 SPRYD4Q8WW59 207 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-201ENST00000273317 ALG8Q9BVK2 526 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 FZD3Q9NPG1 666 aa7.59□□□□□ -1.19
LIMD1-201ENST00000273317 COL2A1P02458 1487 aaPredicted RBP7.59□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF736B4DX44 427 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms