RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SF3B4Q15427 424 aaKnown RBP eCLIP8.87□□□□□ -0.997e-7■■■■■ 29.7
VPS41-201ENST00000265745 CEBPEQ15744 281 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 SPIN4Q56A73 249 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 CT45A2Q5DJT8 189 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ARSJQ5FYB0 599 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 WIPI1Q5MNZ9 446 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 NSUN5P2Q63ZY6 315 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ACSM2BQ68CK6 577 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 POMZP3Q6PJE2 187 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ARSKQ6UWY0 536 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 SH2D5Q6ZV89 423 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 LACC1Q8IV20 430 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 PM20D2Q8IYS1 436 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 SAMD14Q8IZD0 417 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 WDSUB1Q8N9V3 476 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 NAXEQ8NCW5 288 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 FAM83FQ8NEG4 500 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 TNIP2Q8NFZ5 429 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 C16orf78Q8WTQ4 265 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 KAT2AQ92830 837 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ABTB1Q969K4 478 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 TMBIM1Q969X1 311 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 EXOSC8Q96B26 276 aaKnown RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 WDYHV1Q96HA8 205 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 KCNA7Q96RP8 456 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 RHOXF2Q9BQY4 288 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 UGT2B28Q9BY64 529 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 GSTO2Q9H4Y5 243 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 ANKRA2Q9H9E1 313 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 GALNT9Q9HCQ5 603 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 SLC35C2Q9NQQ7 365 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 SIRT5Q9NXA8 310 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 EHD3Q9NZN3 535 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 PSMC3IPQ9P2W1 217 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 ZNF629Q9UEG4 869 aaPredicted RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 TBK1Q9UHD2 729 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 EMCNQ9ULC0 261 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 EXO1Q9UQ84 846 aaKnown RBP8.87□□□□□ -0.99
VPS41-201ENST00000265745 STK38LQ9Y2H1 464 aa8.87□□□□□ -0.99
VPS41-201ENST00000265745 CACNA1CQ13936 2221 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CCDC151A5D8V7 595 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 OR6C70A6NIJ9 312 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CD8B2A6NJW9 211 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 PLOD3O60568 738 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 NME6O75414 186 aaPredicted RBP8.86□□□□□ -0.99
VPS41-201ENST00000265745 REM1O75628 298 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CBR3O75828 277 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 BCAS2O75934 225 aaPredicted RBP8.86□□□□□ -0.99
VPS41-201ENST00000265745 BMP2P12643 396 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 BMP5P22003 454 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 TIA1P31483 386 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS41-201ENST00000265745 FOXA1P55317 472 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 WNT3P56703 355 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CORO7P57737 925 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 BTKQ06187 659 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 TOMM20Q15388 145 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 DCST1Q5T197 706 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 ANGPTL8Q6UXH0 198 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 ZYG11AQ6WRX3 759 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 SPNS3Q6ZMD2 512 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 TRIM46Q7Z4K8 759 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 YRDCQ86U90 279 aaKnown RBP8.86□□□□□ -0.99
VPS41-201ENST00000265745 CCNYL1Q8N7R7 359 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 RELL2Q8NC24 303 aaPredicted RBP8.86□□□□□ -0.99
VPS41-201ENST00000265745 OR9A2Q8NGT5 310 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS41-201ENST00000265745 ZPLD1Q8TCW7 415 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 TMCO6Q96DC7 493 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CCDC126Q96EE4 140 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 VSTM2LQ96N03 204 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 COL21A1Q96P44 957 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 BTBD9Q96Q07 612 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 OSBPL11Q9BXB4 747 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 CALHM2Q9HA72 323 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 MID1IP1Q9NPA3 183 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 PFDN4Q9NQP4 134 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 TAS2R7Q9NYW3 318 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 KLRF1Q9NZS2 232 aa8.86□□□□□ -0.99
VPS41-201ENST00000265745 PRAMEF25A6NGN4 478 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 DVL2O14641 736 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 CTAG2O75638 210 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 ZWINTO95229 277 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 ACTL6AO96019 429 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 SHBGP04278 402 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 ANXA4P09525 319 aaPredicted RBP8.85□□□□□ -0.99
VPS41-201ENST00000265745 MYL2P10916 166 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 CPN1P15169 458 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 DDCP20711 480 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 MPIP34949 423 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 PEX19P40855 299 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 KIR2DL3P43628 341 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 GSTM5P46439 218 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 CCT5P48643 541 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 ZNF136P52737 540 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 DNAJB13P59910 316 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 NAA20P61599 178 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 SNTB1Q13884 538 aaKnown RBP8.85□□□□□ -0.99
VPS41-201ENST00000265745 PRSS53Q2L4Q9 553 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms