RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PCDHGA10Q9Y5H3 936 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 EFCAB9A8MZ26 197 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 MASP2O00187 686 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 AP3D1O14617 1153 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 F10P00742 488 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CT62P0C5K7 136 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 DCTN2Q13561 401 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ADPRMQ3LIE5 342 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 VWA2Q5GFL6 755 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF691Q5VV52 312 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 XAF1Q6GPH4 301 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 UBE2Q1Q7Z7E8 422 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR8H2Q8N162 312 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ORAI1Q96D31 301 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 COQ8BQ96D53 544 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 QRFPRQ96P65 431 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TMED9Q9BVK6 235 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 GTPBP2Q9BX10 602 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CD320Q9NPF0 282 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 COL12A1Q99715 3063 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 A8MV72 311 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TLR4O00206 839 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 RAD1O60671 282 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 UGDHO60701 494 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CNOT3O75175 753 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 IFNA14P01570 189 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 FHP07954 510 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CLUP10909 449 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PORP16435 677 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PKLRP30613 574 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TRHRP34981 398 aaPredicted RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR1D5P58170 312 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PRR5P85299 388 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 MAPK14Q16539 360 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 LRIT3Q3SXY7 679 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ACSM5Q6NUN0 579 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF765Q7L2R6 523 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 SYT14Q8NB59 555 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 SETD9Q8NE22 299 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 BBS1Q8NFJ9 593 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR4K14Q8NGD5 310 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR51G2Q8NGK0 314 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR52P1PQ8NH57 321 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 OR5P2Q8WZ92 322 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CEP19Q96LK0 163 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 CTRCQ99895 268 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 TSSK6Q9BXA6 273 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 RBM38Q9H0Z9 239 aaKnown RBP8.53□□□□□ -1.04
CKAP2-201ENST00000258607 MUC13Q9H3R2 512 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 C3orf14Q9HBI5 128 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 PRDM7Q9NQW5 492 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 SLC7A7Q9UM01 511 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 HCN4Q9Y3Q4 1203 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 ENPP4Q9Y6X5 453 aa8.53□□□□□ -1.04
CKAP2-201ENST00000258607 A0A1B0GVT2 93 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 EIF3FO00303 357 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 WBP4O75554 376 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ALPPP05187 535 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 GRK5P34947 590 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PCGF2P35227 344 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 CD79BP40259 229 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 RAB25P57735 213 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 REEP5Q00765 189 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 DMRTC1Q5HYR2 192 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 GTF2IRD2BQ6EKJ0 949 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 GTF2IRD2Q86UP8 949 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MCFD2Q8NI22 146 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 STARD8Q92502 1023 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 VMP1Q96GC9 406 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 POLR2J2Q9GZM3 115 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 FBXL4Q9UKA2 621 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ERVK-19Q9WJR5 959 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MTCH2Q9Y6C9 303 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 RHPN2P1A8MT19 583 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 IMPA2O14732 288 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 UGT2B11O75310 529 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 DLGAP3O95886 979 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ALOX5P09917 674 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ARAFP10398 606 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 POU3F3P20264 500 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 BCKDHBP21953 392 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MMP11P24347 488 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ITGA1P56199 1179 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 DMWDQ09019 674 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 INAQ16352 499 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 MICAQ29983 383 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF630Q2M218 657 aaPredicted RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 LYPD4Q6UWN0 246 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PLPP6Q8IY26 295 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PACRGLQ8N7B6 248 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 PFN4Q8NHR9 129 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 CREB3L4Q8TEY5 395 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SETD7Q8WTS6 366 aaKnown RBP8.52□□□□□ -1.05
CKAP2-201ENST00000258607 SLC35A4Q96G79 324 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 ZFYVE21Q9BQ24 234 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 HDHD5Q9BXW7 423 aa8.52□□□□□ -1.05
CKAP2-201ENST00000258607 FN3KQ9H479 309 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms