RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RIIAD1A6NNX1 92 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 AGAP14A8MT82 685 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NPIPA7E9PJI5 369 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 HMGN4O00479 90 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR10H2O60403 315 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NFATC1O95644 943 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NPIPA8P0DM63 369 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ACADMP11310 421 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SDHBP21912 280 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ALAS2P22557 587 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PYCR1P32322 319 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SOX18P35713 384 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 KCNJ5P48544 419 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GNG2P59768 71 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ARPC4P59998 168 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PPP3R1P63098 170 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PSPHP78330 225 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 BNC1Q01954 994 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 RGS1Q08116 209 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 INSL4Q14641 139 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 MPEG1Q2M385 716 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 DEFB134Q4QY38 66 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 C2orf27AQ580R0 203 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 C6orf132Q5T0Z8 1188 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PRPF38BQ5VTL8 546 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 TMEM215Q68D42 235 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 CCDC190Q86UF4 302 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PARGQ86W56 976 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PLPP6Q8IY26 295 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 CPA6Q8N4T0 437 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 COX18Q8N8Q8 333 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GDPD1Q8N9F7 314 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR2T33Q8NG76 320 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GPR32P1Q8NGA4 272 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR6K6Q8NGW6 343 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR4C6Q8NH72 309 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SUN3Q8TAQ9 357 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SETD6Q8TBK2 473 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SETD7Q8WTS6 366 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 PCNPQ8WW12 178 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 SPRYD4Q8WW59 207 aaPredicted RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 SNAPC3Q92966 411 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ZSWIM3Q96MP5 696 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR2A14Q96R47 310 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FBXL12Q9NXK8 326 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 MRPL39Q9NYK5 338 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 COQ3Q9NZJ6 369 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 MRPL15Q9P015 296 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 NTNG1Q9Y2I2 539 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 EXOSC1Q9Y3B2 195 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 A0A075B6Q4 140 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 LOC105369274A0A096LPK9 316 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 EDDM13A0A1B0GTR0 161 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 A0A1W2PP55 124 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PRAMEF25A6NGN4 478 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 HMX3A6NHT5 357 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FFAR1O14842 300 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PROM1O43490 865 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NTN1O95631 604 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 IL1AP01583 271 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 HMGN1P05114 100 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GYPBP06028 91 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GKN3PP0CG01 181 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PSMA3P25788 255 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ACSL1P33121 698 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ERVFC1P60507 584 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GPNMBQ14956 572 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 C18orf63Q68DL7 685 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FIGNL1Q6PIW4 674 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ZNF438Q7Z4V0 828 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FGD2Q7Z6J4 655 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR4N4Q8N0Y3 316 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NANOGP1Q8N7R0 232 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 DNAJC5GQ8N7S2 189 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 AMER3Q8N944 861 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SRFBP1Q8NEF9 429 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 OR6C4Q8NGE1 309 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR4C15Q8NGM1 316 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OR2L2Q8NH16 312 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GNPDA2Q8TDQ7 276 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FBLIM1Q8WUP2 373 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ZNF296Q8WUU4 475 aaPredicted RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 SNX33Q8WV41 574 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 DEDD2Q8WXF8 326 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 OSTF1Q92882 214 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 ARRDC3Q96B67 414 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 TRMT61AQ96FX7 289 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 RIPOR3Q96MK2 946 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 CD180Q99467 661 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 GAL3ST1Q99999 423 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 MS4A8Q9BY19 250 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 RBCK1Q9BYM8 510 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 DPH1Q9BZG8 443 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 BRD7Q9NPI1 651 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 FTSJ1Q9UET6 329 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SLC23A2Q9UGH3 650 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 NDRG2Q9UN36 371 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 SATB2Q9UPW6 733 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms