RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RAB36O95755 333 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 NPPBP16860 134 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 CPEP16870 476 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 SLC9A3P48764 834 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 HOXC5Q00444 222 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 CD83Q01151 205 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 PYDC2Q56P42 97 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 SAXO2Q658L1 398 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 HIST2H2AA3Q6FI13 130 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 HSDL2Q6YN16 418 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 KIAA1143Q96AT1 154 aaPredicted RBP15.98■□□□□ 0.15
FOXA1-201ENST00000250448 ZNF514Q96K75 400 aaPredicted RBP15.98■□□□□ 0.15
FOXA1-201ENST00000250448 ZDHHC5Q9C0B5 715 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 TVP23BQ9NYZ1 205 aa15.98■□□□□ 0.15
FOXA1-201ENST00000250448 POLR1CO15160 346 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RGS19P49795 217 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 GNG2P59768 71 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 QPRTQ15274 297 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 EOGTQ5NDL2 527 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 KIAA1161Q6NSJ0 714 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 FAM180BQ6P0A1 224 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 IKBIPQ70UQ0 350 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 CAMKK1Q8N5S9 505 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 ENKURQ8TC29 256 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TMEM203Q969S6 136 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TEFMQ96QE5 360 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RSPO3Q9BXY4 272 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 OR52A5Q9H2C5 316 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 PHPT1Q9NRX4 125 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 SEMA3GQ9NS98 782 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 SPIN1Q9Y657 262 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 A0A1W2PPC1 479 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 PRKYO43930 277 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 GPC1P35052 558 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 KIR2DL3P43628 341 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RD3Q7Z3Z2 195 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TRIM63Q969Q1 353 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 FAM131CQ96AQ9 280 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 NEURL3Q96EH8 262 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 LINC00615Q96LM1 132 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 ICKQ9UPZ9 632 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 PLA2G10O15496 165 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 MTRF1O75570 445 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TP53P04637 393 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 CEACAM5P06731 702 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 CHRNB1P11230 501 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TNNI3P19429 210 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 ETV5P41161 510 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 ETV1P50549 477 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 EIF2B5Q13144 721 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TARDBPQ13148 414 aaKnown RBP eCLIP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RBM45Q8IUH3 476 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TRIM48Q8IWZ4 208 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RLN3Q8WXF3 142 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 JPH3Q8WXH2 748 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 KCTD7Q96MP8 289 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 SORBS1Q9BX66 1292 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RERGLQ9H628 205 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 RPRD1BQ9NQG5 326 aaKnown RBP15.97■□□□□ 0.15
FOXA1-201ENST00000250448 ACOXLQ9NUZ1 547 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 GPSM3Q9Y4H4 160 aa15.97■□□□□ 0.15
FOXA1-201ENST00000250448 TLX2O43763 284 aaPredicted RBP15.96■□□□□ 0.15
FOXA1-201ENST00000250448 CHRM5P08912 532 aaPredicted RBP15.96■□□□□ 0.15
FOXA1-201ENST00000250448 FOSL1P15407 271 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 ACADLP28330 430 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 SSTR4P31391 388 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 SDC2P34741 201 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 CLCNKAP51800 687 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 MADCAM1Q13477 382 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 MLF2Q15773 248 aaPredicted RBP15.96■□□□□ 0.15
FOXA1-201ENST00000250448 TMIGD1Q6UXZ0 262 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 FAM26EQ8N5C1 309 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 OR4D11Q8NGI4 311 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 GIMAP1Q8WWP7 306 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 SLC5A11Q8WWX8 675 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 APOOQ9BUR5 198 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 SGPP1Q9BX95 441 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 POLDIP3Q9BY77 421 aaKnown RBP15.96■□□□□ 0.15
FOXA1-201ENST00000250448 FOXQ1Q9C009 403 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 ANKRA2Q9H9E1 313 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 FGF22Q9HCT0 170 aa15.96■□□□□ 0.15
FOXA1-201ENST00000250448 YARS2Q9Y2Z4 477 aaKnown RBP15.96■□□□□ 0.15
FOXA1-201ENST00000250448 SMIM30A4D0T7 59 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 PDE9AO76083 593 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 HLA-DMAP28067 261 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 BNC1Q01954 994 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 MLLT1Q03111 559 aaPredicted RBP15.96■□□□□ 0.14
FOXA1-201ENST00000250448 GAS6Q14393 721 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 AGERQ15109 404 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 SYT14P1Q58G82 188 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 LCN1P1Q5VSP4 162 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 UBE2J2Q8N2K1 259 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 FAM160A2Q8N612 972 aaPredicted RBP15.96■□□□□ 0.14
FOXA1-201ENST00000250448 FUZQ9BT04 418 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 MED18Q9BUE0 208 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 CYP8B1Q9UNU6 501 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 MYO15AQ9UKN7 3530 aa15.96■□□□□ 0.14
FOXA1-201ENST00000250448 PLXND1Q9Y4D7 1925 aa15.95■□□□□ 0.14
FOXA1-201ENST00000250448 C17orf113A0A1B0GUU1 675 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms