RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ACP2P11117 423 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 GSTM3P21266 225 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TRIM23P36406 574 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 OR2B6P58173 313 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 BNC1Q01954 994 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 MAP4K2Q12851 820 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SHHQ15465 462 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 CST6Q15828 149 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 KLHL22Q53GT1 634 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF311Q5JNZ3 666 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 C3orf38Q5JPI3 329 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SLC27A4Q6P1M0 643 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 PRICKLE2Q7Z3G6 844 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 VRK2Q86Y07 508 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 OR56A1Q8NGH5 318 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 OR8D4Q8NGM9 314 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SETD6Q8TBK2 473 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TEX47Q8TBZ9 253 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TMEM163Q8TC26 289 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 TM9SF4Q92544 642 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ZG16BQ96DA0 208 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 OR7D2Q96RA2 312 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 SRRQ9GZT4 340 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 RSPH9Q9H1X1 276 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 CNIH4Q9P003 139 aa13.51□□□□□ -0.25
HIF3A-202ENST00000244303 ZFR2Q9UPR6 939 aaKnown RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 GPR55Q9Y2T6 319 aaPredicted RBP13.51□□□□□ -0.25
HIF3A-202ENST00000244303 A0A1W2PP55 124 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SLC35F4A4IF30 521 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 PRR23AA6NEV1 266 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 GPR89AB7ZAQ6 455 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 PRODHO43272 600 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 IL1AP01583 271 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 APODP05090 189 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 GPR89BP0CG08 455 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 NR2F6P10588 404 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MC3RP41968 323 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 RAB8AP61006 207 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MLLT1Q03111 559 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 CHRNEQ04844 493 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SLC36A4Q6YBV0 504 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SHFQ7M4L6 423 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 DNAJC5GQ8N7S2 189 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 TMEM145Q8NBT3 493 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 OR2L5Q8NG80 312 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 GATAD2BQ8WXI9 593 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SLC38A1Q9H2H9 487 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 ABCB9Q9NP78 766 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 TIGARQ9NQ88 270 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 PHPT1Q9NRX4 125 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 DNAH14Q0VDD8 3507 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SMIM30A4D0T7 59 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SCAMP1O15126 338 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 UBXN7O94888 489 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 IL7P13232 177 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 RFX2P48378 723 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 RPS25P62851 125 aaKnown RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 RAB40BQ12829 278 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 C2orf27AQ580R0 203 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 ARMC4Q5T2S8 1044 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 NXNL2Q5VZ03 156 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 ZNF544Q6NX49 715 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SLC48A1Q6P1K1 146 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 LAPTM4BQ86VI4 370 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 NUP43Q8NFH3 380 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 OR2L3Q8NG85 312 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 OR9A2Q8NGT5 310 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 GNPDA2Q8TDQ7 276 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 FAM46AQ96IP4 442 aaKnown RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MYADMQ96S97 322 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 RAB11FIP5Q9BXF6 653 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MIXL1Q9H2W2 232 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 FGF20Q9NP95 211 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SEMA4GQ9NTN9 838 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 MRPS18AQ9NVS2 196 aaKnown RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 PLEKHB1Q9UF11 243 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-202ENST00000244303 PCDHGB2Q9Y5G2 931 aa13.5□□□□□ -0.25
HIF3A-202ENST00000244303 SCN2AQ99250 2005 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 LINC00854A0A1B0GVQ3 168 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 AP3D1O14617 1153 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 EMC8O43402 210 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 PRICKLE3O43900 615 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 GUCY1B2O75343 617 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 ALPPP05187 535 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 F3P13726 295 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 CSNK2A2P19784 350 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 PEBP1P30086 187 aaKnown RBP13.49□□□□□ -0.25
HIF3A-202ENST00000244303 GDI1P31150 447 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 HTR3AP46098 478 aa13.49□□□□□ -0.25
HIF3A-202ENST00000244303 MTNR1AP48039 350 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms