RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 IMP4Q96G21 291 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 OR4K3Q96R72 315 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 SLC38A3Q99624 504 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 NXF5Q9H1B4 397 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 YIPF1Q9Y548 306 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 KCPQ6ZWJ8 1503 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 C8AP07357 584 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 STEAP4Q687X5 459 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 GPALPP1Q8IXQ4 340 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 PAPD5Q8NDF8 572 aaKnown RBP7.15□□□□□ -1.26
RIF1-201ENST00000243326 ANKK1Q8NFD2 765 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 OVCA2Q8WZ82 227 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 NPY6RQ99463 290 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 EPHA6Q9UF33 1036 aa7.15□□□□□ -1.26
RIF1-201ENST00000243326 ZNF850A8MQ14 1090 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 RRASP10301 218 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CCKBRP32239 447 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CAPZA1P52907 286 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 ACY1Q03154 408 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 OR4K5Q8NGD3 323 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 NEDD4LQ96PU5 975 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 OR5M11Q96RB7 305 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 KCNH6Q9H252 994 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CDH10Q9Y6N8 788 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CNOT1A5YKK6 2376 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 TRAV27A0A087WT01 109 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 EBLN1P0CF75 366 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 HLA-DMAP28067 261 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 DOC2AQ14183 400 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 VASNQ6EMK4 673 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 ST6GALNAC5Q9BVH7 336 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 ATPIF1Q9UII2 106 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 KDELR3O43731 214 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 RBMXP38159 391 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 SERINC3Q13530 473 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 C12orf76Q8N812 135 aaPredicted RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 SDSLQ96GA7 329 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 DOHHQ9BU89 302 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CLEC2DQ9UHP7 191 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 LAMB4A4D0S4 1761 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 LAMA4Q16363 1823 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 A0A0B4J2A0 478 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 WNT9AO14904 365 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 DCNP07585 359 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 BMP2P12643 396 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CPOXP36551 454 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 C1orf61Q13536 156 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 RHEBQ15382 184 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 ADGRF1Q5T601 910 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 TOMM40LQ969M1 308 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 FUBP1Q96AE4 644 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 MKRN2Q9H000 416 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 NDUFAF4Q9P032 175 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 SHPKQ9UHJ6 478 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 E7ESA3 106 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 EPCAMP16422 314 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 HERV-K104P61576 105 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 CHST14Q8NCH0 376 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 TSACCQ96A04 125 aaPredicted RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 RAD9AQ99638 391 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 TUBA1CQ9BQE3 449 aa7.15□□□□□ -1.27
RIF1-201ENST00000243326 FAM120CQ9NX05 1096 aaKnown RBP7.15□□□□□ -1.27
RIF1-201ENST00000243326 FAAHO00519 579 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PRAMEF11O60813 436 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RFPL3O75679 317 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RAB5BP61020 215 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ERVK-21P61565 698 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ST3GAL3Q11203 375 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RSC1A1Q92681 617 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 MRPL38Q96DV4 380 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 SEC22AQ96IW7 307 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ACKR4Q9NPB9 350 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CALML5Q9NZT1 146 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RBPJLQ9UBG7 517 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PRSS21Q9Y6M0 314 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SPATA31A6Q5VVP1 1343 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CYB5AP00167 134 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SELPP16109 830 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF763Q0D2J5 394 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.14□□□□□ -1.27
RIF1-201ENST00000243326 SLC27A4Q6P1M0 643 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 LIPIQ6XZB0 460 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PRSS48Q7RTY5 328 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SMARCD2Q92925 531 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 THAP7Q9BT49 309 aaPredicted RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 AGPAT4Q9NRZ5 378 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 N4BP2Q86UW6 1770 aaPredicted RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 SCDO00767 359 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CLRN1P58418 232 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 MICAQ29983 383 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF584Q8IVC4 421 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 GOLM1Q8NBJ4 401 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 TLR9Q9NR96 1032 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 OARD1Q9Y530 152 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 BCL9LQ86UU0 1499 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SCAMP2O15127 329 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 UQCRC2P22695 453 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SLC6A6P31641 620 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms