RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MYBPC3Q14896 1274 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 RUNDC3AQ59EK9 446 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZNF311Q5JNZ3 666 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 COX15Q7KZN9 410 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 EFHD2Q96C19 240 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 NEURL3Q96EH8 262 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 HSPBAP1Q96EW2 488 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 GPR83Q9NYM4 423 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLAMF8Q9P0V8 285 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 MKLN1Q9UL63 735 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 SAMD4AQ9UPU9 718 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 PCDH15Q96QU1 1955 aa10.35□□□□□ -0.75
TNFAIP3-201ENST00000237289 M0QX08 132 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 ANKRD28O15084 1053 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CD46P15529 392 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 MAGEA8P43361 318 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYB561P49447 251 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 GPR143P51810 404 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 RGS8P57771 180 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 C21orf58P58505 322 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PSPHP78330 225 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 DCAF10Q5QP82 559 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 BBS10Q8TAM1 723 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SPATA9Q9BWV2 254 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PIGUQ9H490 435 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PTGES2Q9H7Z7 377 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 STOML1Q9UBI4 398 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CES1P1Q9UKY3 287 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 YARS2Q9Y2Z4 477 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 VSTM2BA6NLU5 285 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PLOD2O00469 737 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 ABCB7O75027 752 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 GALNSP34059 522 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 EIF2S3P41091 472 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PPICP45877 212 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 GSK3BP49841 420 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 TLR1Q15399 786 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PRICKLE4Q2TBC4 344 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 FAM91A1Q658Y4 838 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 JMJD6Q6NYC1 403 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 KIRREL2Q6UWL6 708 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 RETREG3Q86VR2 466 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 M1APQ8TC57 530 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 ZFP90Q8TF47 636 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 POP5Q969H6 163 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 TMBIM1Q969X1 311 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC22A11Q9NSA0 550 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SUCOQ9UBS9 1254 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SH3GLB1Q9Y371 365 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 HS3ST3B1Q9Y662 390 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 IGLV3-12A0A075B6K2 115 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 GSC2O15499 205 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 TPST1O60507 370 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 IL1RL1Q01638 556 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 DCST2Q5T1A1 773 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC15A3Q8IY34 581 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC16A11Q8NCK7 471 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 C1orf21Q9H246 121 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 MUC13Q9H3R2 512 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 IFT52Q9Y366 437 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CROCCQ5TZA2 2017 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 FBP2O00757 339 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 F10P00742 488 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 NQO1P15559 274 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 MRPL19P49406 292 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 VMACQ2NL98 169 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYP27C1Q4G0S4 372 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 TCTN3Q6NUS6 607 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 HPS6Q86YV9 775 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 ULK2Q8IYT8 1036 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 SLC34A3Q8N130 599 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 CYP4Z2PQ8N1L4 340 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 C10orf53Q8N6V4 93 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 FAM156AQ8NDB6 213 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PAIP1Q9H074 479 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 MTHFD2LQ9H903 347 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 PPP4R1LQ9P1A2 415 aa10.34□□□□□ -0.75
TNFAIP3-201ENST00000237289 ACOX3O15254 700 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 NME6O75414 186 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 CDC20Q12834 499 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 ZNF628Q5EBL2 1059 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 PLAG1Q6DJT9 500 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 YTHDF3Q7Z739 585 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 TMEM19Q96HH6 336 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 REXO5Q96IC2 774 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 RNF145Q96MT1 663 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 ANKRD10Q9NXR5 420 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 B4GALT7Q9UBV7 327 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 NPFFR2Q9Y5X5 522 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 TRAPPC6AO75865 159 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 CCNJQ5T5M9 372 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 PACS2Q86VP3 889 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 GATSQ8NAP1 163 aa10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 VANGL1Q8TAA9 524 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-201ENST00000237289 BRIX1Q8TDN6 353 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms