RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 KCTD9Q7L273 389 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 AGBL5Q8NDL9 886 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CDS1Q92903 461 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 CHP2O43745 196 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 RIDAP52758 137 aaKnown RBP17.46■□□□□ 0.39
CLIP2-201ENST00000223398 FXYD6P3P58550 94 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 HNRNPA0Q13151 305 aaKnown RBP17.46■□□□□ 0.39
CLIP2-201ENST00000223398 PKDCCQ504Y2 493 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 ZFP41Q8N8Y5 198 aa17.46■□□□□ 0.39
CLIP2-201ENST00000223398 NUFIP1Q9UHK0 495 aaKnown RBP17.46■□□□□ 0.39
CLIP2-201ENST00000223398 EDIL3O43854 480 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CTHP32929 405 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ZP2Q05996 745 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ATAD3CQ5T2N8 411 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 TEX26Q8N6G2 289 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CNEP1R1Q8N9A8 125 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CASTOR1Q8WTX7 329 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 TANKQ92844 425 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CTRCQ99895 268 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 DPH1Q9BZG8 443 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 TREX1Q9NSU2 369 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 TRAPPC13A5PLN9 417 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 PPP6CO00743 305 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 PPP1R3DO95685 299 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 DPP6P42658 865 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 PLBD1Q6P4A8 553 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ARHGAP11AQ6P4F7 1023 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 IL20RBQ6UXL0 311 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 SHFQ7M4L6 423 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 MEX3DQ86XN8 651 aaKnown RBP17.45■□□□□ 0.38
CLIP2-201ENST00000223398 IQCF1Q8N6M8 205 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 OR6C1Q96RD1 312 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ENY2Q9NPA8 101 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 KIAA0355O15063 1070 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 AOAHP28039 575 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 HOXC5Q00444 222 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 HSD17B12Q53GQ0 312 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CEACAM19Q7Z692 300 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 KLBQ86Z14 1044 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 NETO1Q8TDF5 533 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 YTHDF1Q9BYJ9 559 aaKnown RBP17.45■□□□□ 0.38
CLIP2-201ENST00000223398 HS3ST2Q9Y278 367 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 HEMK1Q9Y5R4 338 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-201ENST00000223398 RNF215Q9Y6U7 377 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ABLIM3O94929 683 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 F10P00742 488 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ZBED5Q49AG3 693 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 DCAF12Q5T6F0 453 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 PLCZ1Q86YW0 608 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 PGBD5Q8N414 524 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 SCGB3A2Q96PL1 93 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CDH20Q9HBT6 801 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 TRBV2A0A0J9YWF9 115 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 OR14I1A6ND48 311 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 OR7A10O76100 309 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 HMGN2P05204 90 aaKnown RBP17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ADAM15Q13444 863 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 CCNJQ5T5M9 372 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 MINDY1Q8N5J2 469 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 SYT14Q8NB59 555 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ZNF675Q8TD23 568 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 FUZQ9BT04 418 aa17.45■□□□□ 0.38
CLIP2-201ENST00000223398 ATXN1LP0C7T5 689 aaKnown RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 MAN2A2P49641 1150 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 NPRL3Q12980 569 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 PIN1Q13526 163 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 CITED4Q96RK1 184 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 ATG5Q9H1Y0 275 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 HHATLQ9HCP6 504 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 C2orf42Q9NWW7 574 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 PFDN2Q9UHV9 154 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 MYH3P11055 1940 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 ZSCAN5BA6NJL1 495 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 FAM189A1O60320 539 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 UGDHO60701 494 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 FESP07332 822 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 SDC1P18827 310 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 CFL1P23528 166 aaKnown RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 OR7A5Q15622 319 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 PDSS2Q86YH6 399 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 FEVQ99581 238 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 SLAMF7Q9NQ25 335 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 GSKIPQ9P0R6 139 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 MYH10P35580 1976 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 H0YGG7 62 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 RAD51DO75771 328 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 ARF3P61204 181 aaPredicted RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 APOFQ13790 326 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 TMPRSS12Q86WS5 348 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 TRMT10AQ8TBZ6 339 aaKnown RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 NXPE3Q969Y0 559 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 NEDD4LQ96PU5 975 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 CNN2Q99439 309 aaKnown RBP17.44■□□□□ 0.38
CLIP2-201ENST00000223398 ACPTQ9BZG2 426 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 POLE3Q9NRF9 147 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 CNIH4Q9P003 139 aa17.44■□□□□ 0.38
CLIP2-201ENST00000223398 USP36Q9P275 1121 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms