RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 OPN5Q6U736 354 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 C9orf40Q8IXQ3 194 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 TMEM156Q8N614 296 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 ZNF321PQ8N8H1 164 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 CDRT4Q8N9R6 151 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 NUP43Q8NFH3 380 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 OR9I1Q8NGQ6 314 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 FAM120BQ96EK7 910 aaKnown RBP12.6□□□□□ -0.39
UPK1A-201ENST00000222275 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
UPK1A-201ENST00000222275 GAL3ST4Q96RP7 486 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 LEF1Q9UJU2 399 aaPredicted RBP12.6□□□□□ -0.39
UPK1A-201ENST00000222275 MRTO4Q9UKD2 239 aaKnown RBP12.6□□□□□ -0.39
UPK1A-201ENST00000222275 FAF1Q9UNN5 650 aaPredicted RBP12.6□□□□□ -0.39
UPK1A-201ENST00000222275 NDUFAF1Q9Y375 327 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 TACC2O95359 2948 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 DCHS2Q6V1P9 2916 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
UPK1A-201ENST00000222275 A1L4Q6 167 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 BBIP1A8MTZ0 92 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 NR5A2O00482 541 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ERN1O75460 977 aaKnown RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ITGA10O75578 1167 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 PSMG1O95456 288 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 CLDN1O95832 211 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 LDLRP01130 860 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 CLPSP04118 112 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ABCB1P08183 1280 aaPredicted RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ZCCHC18P0CG32 403 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 NAGAP17050 411 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 TRHRP34981 398 aaPredicted RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SOAT1P35610 550 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 CYB561P49447 251 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 TDGF1P3P51864 188 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 PRKAG1P54619 331 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 PHC1P78364 1004 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ARG2P78540 354 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ZNF155Q12901 538 aaPredicted RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 KLF10Q13118 480 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 STX5Q13190 355 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 PIGGQ5H8A4 983 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 RPUSD3Q6P087 351 aaKnown RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ANKRD46Q86W74 232 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 FUNDC1Q8IVP5 155 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 CLECL1Q8IZS7 167 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 DOK4Q8TEW6 326 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SSC4DQ8WTU2 575 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 MAGED4Q96JG8 741 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SIGLEC12Q96PQ1 595 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 BTBD9Q96Q07 612 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SLX1AQ9BQ83 275 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 UTP23Q9BRU9 249 aaKnown RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 SIRT3Q9NTG7 399 aaPredicted RBP12.59□□□□□ -0.39
UPK1A-201ENST00000222275 GIN1Q9NXP7 522 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ANKRD10Q9NXR5 420 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 ADGRG4Q8IZF6 3080 aa12.59□□□□□ -0.39
UPK1A-201ENST00000222275 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 WWP2O00308 870 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 TO15178 435 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 KRT75O95678 551 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 AGR2O95994 175 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 EFNA1P20827 205 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 PTGER1P34995 402 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 SOX18P35713 384 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 KRT20P35900 424 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 CD96P40200 585 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ZFP36L2P47974 494 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 HLCSP50747 726 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 PSMD4P55036 377 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 RPP38P78345 283 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 MRPS22P82650 360 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 PMP22Q01453 160 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 CYP27C1Q4G0S4 372 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 C6orf10Q5SRN2 563 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ZNF227Q86WZ6 799 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 BEST3Q8N1M1 668 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ZNF441Q8N8Z8 693 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ST6GALNAC3Q8NDV1 305 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 RP9Q8TA86 221 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 THAP3Q8WTV1 239 aaPredicted RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 NUDT8Q8WV74 236 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ADIPOR1Q96A54 375 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 VPS33AQ96AX1 596 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 SGCZQ96LD1 299 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 VSTM2LQ96N03 204 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 LRRC37BQ96QE4 947 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
UPK1A-201ENST00000222275 LMF2Q9BU23 707 aaKnown RBP12.58□□□□□ -0.4
UPK1A-201ENST00000222275 ITPAQ9BY32 194 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms