RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PNMTP11086 282 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ACVR1BP36896 505 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 MAN2A2P49641 1150 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 NKX3-2P78367 333 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 GNMTQ14749 295 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 CNPY1Q3B7I2 92 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ABHD12BQ7Z5M8 362 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 AGBL5Q8NDL9 886 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 SCGB1C1Q8TD33 95 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 CCM2LQ9NUG4 571 aaPredicted RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 DNMT3BQ9UBC3 853 aaKnown RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 NUP50Q9UKX7 468 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 NENFQ9UMX5 172 aa17.96■□□□□ 0.47
SMPD3-201ENST00000219334 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
SMPD3-201ENST00000219334 ANTXRLA6NF34 631 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SLC26A5P58743 744 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SH3BP2P78314 561 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 DCDC5Q6ZRR9 648 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SHFQ7M4L6 423 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 NRMQ8IXM6 262 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 PRR22Q8IZ63 422 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 CD200R1Q8TD46 325 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 ATOH1Q92858 354 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SLAMF7Q9NQ25 335 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 NSG1A0A0A6YYJ2 146 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 IFNA7P01567 189 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 MFSD6LQ8IWD5 586 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 GPR150Q8NGU9 434 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 EDAQ92838 391 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 MUS81Q96NY9 551 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 STARD5Q9NSY2 213 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 FBXL3Q9UKT7 428 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 VDAC3Q9Y277 283 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 NUMBLQ9Y6R0 609 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 WASH4PA8MWX3 477 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 OR2T1O43869 369 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 GDF1P27539 372 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 PRPS1P60891 318 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 FAM46BQ96A09 425 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 MAGIXQ9H6Y5 334 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 OR6C70A6NIJ9 312 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SULT2B1O00204 365 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 LCATP04180 440 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 CD79AP11912 226 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 IFNGR1P15260 489 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 MAOBP27338 520 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 CSNK1DP48730 415 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 OR4K5Q8NGD3 323 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 OR9A2Q8NGT5 310 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 FAM46AQ96IP4 442 aaKnown RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 SLC6A7Q99884 636 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 PIGBOS1A0A0B4J2F0 54 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 JRKO75564 520 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 STK11Q15831 433 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 CDHR3Q6ZTQ4 885 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 GCDHQ92947 438 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 TRIM43Q96BQ3 446 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-201ENST00000219334 CCDC106Q9BWC9 280 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 NELFAQ9H3P2 528 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 COPZ2Q9P299 210 aa17.95■□□□□ 0.46
SMPD3-201ENST00000219334 UBL4AP11441 157 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 MC3RP41968 323 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 HTR6P50406 440 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 TLDC1Q6P9B6 456 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ZNF517Q6ZMY9 492 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-201ENST00000219334 PPP1R35Q8TAP8 253 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 MOCOSQ96EN8 888 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 TMEM9Q9P0T7 183 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 SH3BGRL2Q9UJC5 107 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 CLIC3O95833 236 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 TMEM225BP0DP42 221 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 F3P13726 295 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 CSNK2A1P68400 391 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-201ENST00000219334 RAB12Q6IQ22 244 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 GATAD2BQ8WXI9 593 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 RFT1Q96AA3 541 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 HIF3AQ9Y2N7 669 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 GMEB1Q9Y692 573 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 SOBPA7XYQ1 873 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 HIDE1A8MVS5 230 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 NDUFB2O95178 105 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 MMP2P08253 660 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ABOP16442 354 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 POU3F2P20265 443 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-201ENST00000219334 RAB15P59190 212 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 MARCH8Q5T0T0 291 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 KLBQ86Z14 1044 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 CNIH3Q8TBE1 160 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 RTP4Q96DX8 246 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 USB1Q9BQ65 265 aaKnown RBP17.94■□□□□ 0.46
SMPD3-201ENST00000219334 POTEKPQ9BYX7 375 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 DMRT3Q9NQL9 472 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 PAK1IP1Q9NWT1 392 aaPredicted RBP17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ERVK-19Q9WJR5 959 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 TSPAN9O75954 239 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 ADAP00813 363 aa17.94■□□□□ 0.46
SMPD3-201ENST00000219334 SFTPBP07988 381 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms