RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RAPSNQ13702 412 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ERV3-1Q14264 604 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TSTQ16762 297 aaKnown RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 HMBOX1Q6NT76 420 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PAMR1Q6UXH9 720 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 OR56A3Q8NH54 315 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CCDC107Q8WV48 283 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 KLHL6Q8WZ60 621 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CREB3L1Q96BA8 519 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SLC45A3Q96JT2 553 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF354BQ96LW1 612 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 C1GALT1Q9NS00 363 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PRODH2Q9UF12 536 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 FBXO9Q9UK97 447 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SRPK3Q9UPE1 567 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CMAHPQ9Y471 501 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 LCTP09848 1927 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 THSD7BQ9C0I4 1608 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ACACAQ13085 2346 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 OR2AT4A6NND4 320 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ANHXE9PGG2 379 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SCDO00767 359 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TLX3O43711 291 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 XPNPEP2O43895 674 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 LDB3O75112 727 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 HBQ1P09105 142 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 S100GP29377 79 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF33BQ06732 778 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 GANABQ14697 944 aaKnown RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 C19orf47Q8N9M1 422 aaKnown RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CADM4Q8NFZ8 388 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ISL2Q96A47 359 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 MND1Q9BWT6 205 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ALOXE3Q9BYJ1 711 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 POLR2J3Q9H1A7 115 aaKnown RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CD93Q9NPY3 652 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SLC17A4Q9Y2C5 497 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TSPAN11A1L157 253 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 FUOMA2VDF0 154 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PLD2O14939 933 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 NPPAP01160 153 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 GIMD1P0DJR0 217 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 IL7P13232 177 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 EMP2P54851 167 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ENPP2Q13822 863 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 EFR3AQ14156 821 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 HLA-BQ31612 363 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ASB18Q6ZVZ8 466 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 LSMEM2Q8N112 164 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 KLHL36Q8N4N3 616 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TP53I13Q8NBR0 393 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 C15orf40Q8WUR7 153 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TCTN2Q96GX1 697 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 BMFQ96LC9 184 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 CDADC1Q9BWV3 514 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 OR52A5Q9H2C5 316 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SMOC1Q9H4F8 434 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 FANCFQ9NPI8 374 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SNX11Q9Y5W9 270 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ALG5Q9Y673 324 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 OR5K3A6NET4 321 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SOX1O00570 391 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SCAMP2O15127 329 aaKnown RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PRODHO43272 600 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 UQCRC2P22695 453 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TACR1P25103 407 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 TAS2R38P59533 333 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 HSD11B2P80365 405 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF630Q2M218 657 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 GTDC1Q4AE62 458 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ALKBH2Q6NS38 261 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 RNF111Q6ZNA4 994 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 LARP4Q71RC2 724 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PLCZ1Q86YW0 608 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF527Q8NB42 609 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 RCBTB1Q8NDN9 531 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF548Q8NEK5 533 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SERINC2Q96SA4 455 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 SEC14L4Q9UDX3 406 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 RNF215Q9Y6U7 377 aa8.89□□□□□ -0.99
CCDC113-201ENST00000219299 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 LMO7DNF2Z398 122 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 EMC8O43402 210 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 ENTPD6O75354 484 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 DIRAS1O95057 198 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 CAPN3P20807 821 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 BCKDHBP21953 392 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 AHRP35869 848 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 HLCSP50747 726 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 PCDH1Q08174 1060 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 REEP3Q6NUK4 255 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 PELI3Q8N2H9 469 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 GATSQ8NAP1 163 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
CCDC113-201ENST00000219299 DPH2Q9BQC3 489 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms