RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FAM183AA6NL82 134 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF3P17036 446 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ATP5A1P25705 553 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ELAVL4P26378 380 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CTBSQ01459 385 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 LTB4RQ15722 352 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEM240Q5SV17 173 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 FAHD1Q6P587 224 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 OAFQ86UD1 273 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEFF1Q8IYR6 380 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 GPR135Q8IZ08 494 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 DEFB119Q8N690 84 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 OR7D2Q96RA2 312 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 WACQ9BTA9 647 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 TRIM36Q9NQ86 728 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 LCMT2O60294 686 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 LDB3O75112 727 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 REM1O75628 298 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PSMA3P25788 255 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 KCNJ5P48544 419 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 POU6F2P78424 691 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 REEP5Q00765 189 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ANGPT1Q15389 498 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 RPE65Q16518 533 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEM52BQ4KMG9 183 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PIP5KL1Q5T9C9 394 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 DESI1Q6ICB0 168 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ZC3H14Q6PJT7 736 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CPOQ8IVL8 374 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC41A3Q96GZ6 507 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CSF3RQ99062 836 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 NRTNQ99748 197 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 NDC1Q9BTX1 674 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 BEX2Q9BXY8 128 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 MTHFD2LQ9H903 347 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CHURC1-FNTBB4DL54 471 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 PROM1O43490 865 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 DHFRP00374 187 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 LBX1P52954 281 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 WNT4P56705 351 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 DPTQ07507 201 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CTF1Q16619 201 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 RNF165Q6ZSG1 346 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CSNK1A1LQ8N752 337 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 CDS1Q92903 461 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 TM9SF2Q99805 663 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 KLHL31Q9H511 634 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 RMI1Q9H9A7 625 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 FBXL21Q9UKT6 434 aa11.64□□□□□ -0.55
TM9SF4-201ENST00000217315 GREB1Q4ZG55 1949 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CKAP5Q14008 2032 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 C2orf74A8MZ97 194 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 GRK6P43250 576 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CAPZA2P47755 286 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 BLKP51451 505 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 LRIT3Q3SXY7 679 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 BTLAQ7Z6A9 289 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 GATSQ8NAP1 163 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 OR2L3Q8NG85 312 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 NR4A3Q92570 626 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 FAM83CQ9BQN1 747 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 PINK1Q9BXM7 581 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 DPH1Q9BZG8 443 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CLCA3PQ9Y6N3 262 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CCDC88CQ9P219 2028 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 SSNA1O43805 119 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 LILRB3O75022 631 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CBLP22681 906 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 BCL6P41182 706 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 ILKQ13418 452 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 TCTN3Q6NUS6 607 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 B3GLCTQ6Y288 498 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 JAZF1Q86VZ6 243 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CYB561A3Q8NBI2 242 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 TIMM29Q9BSF4 260 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 HDAC8Q9BY41 377 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 CPNE5Q9HCH3 593 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC7A7Q9UM01 511 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 LRRC37A2A6NM11 1700 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 C2orf92A0A1B0GVN3 265 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 TCRBV21S2A2A0A5A6 115 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 PRODHO43272 600 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 WBP4O75554 376 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 SSTR4P31391 388 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 TNFSF8P32971 234 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 ENPP2Q13822 863 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 PHOSPHO2Q8TCD6 241 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF566Q969W8 418 aa11.63□□□□□ -0.55
TM9SF4-201ENST00000217315 DGAT2Q96PD7 388 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms