RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NHSL2Q5HYW2 709 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 NSUN5P2Q63ZY6 315 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF771Q7L3S4 317 aaPredicted RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 NUP54Q7Z3B4 507 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 YRDCQ86U90 279 aaKnown RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CDYL2Q8N8U2 506 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 BCAS4Q8TDM0 211 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 DYDC1Q8WWB3 177 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ABTB1Q969K4 478 aaPredicted RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CTHRC1Q96CG8 243 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 HSPBAP1Q96EW2 488 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CNRIP1Q96F85 164 aaPredicted RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 WDYHV1Q96HA8 205 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 MAGEB18Q96M61 343 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 CCT8L2Q96SF2 557 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 FAIM2Q9BWQ8 316 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 OSBPL11Q9BXB4 747 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 LIME1Q9H400 295 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 NMRK1Q9NWW6 199 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 KLRF1Q9NZS2 232 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 HEY2Q9UBP5 337 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 PSME2Q9UL46 239 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF780BQ9Y6R6 833 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 ANKHD1Q8IWZ3 2542 aaKnown RBP13.68□□□□□ -0.22
UPK3A-201ENST00000216211 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
UPK3A-201ENST00000216211 MED12LQ86YW9 2145 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 GOLGA8RI6L899 631 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 MANBAO00462 879 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 SNPHO15079 494 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 ACOX3O15254 700 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 UGT2B11O75310 529 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 SUPT7LO94864 414 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 ESRRBO95718 433 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 TAC1P20366 129 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 EMDP50402 254 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 NAGLUP54802 743 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 TRA2BP62995 288 aaKnown RBP13.67□□□□□ -0.22
UPK3A-201ENST00000216211 SF3B4Q15427 424 aaKnown RBP eCLIP13.67□□□□□ -0.22
UPK3A-201ENST00000216211 FLYWCH1Q4VC44 716 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 SLC30A6Q6NXT4 461 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 TMEM81Q6P7N7 255 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 RNASE6Q93091 150 aaKnown RBP13.67□□□□□ -0.22
UPK3A-201ENST00000216211 LRRC46Q96FV0 321 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 ANKRA2Q9H9E1 313 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 PFDN4Q9NQP4 134 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 CCM2LQ9NUG4 571 aaPredicted RBP13.67□□□□□ -0.22
UPK3A-201ENST00000216211 TMEM216Q9P0N5 145 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 VPS29Q9UBQ0 182 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 ZNF629Q9UEG4 869 aaPredicted RBP13.67□□□□□ -0.22
UPK3A-201ENST00000216211 PRODH2Q9UF12 536 aa13.67□□□□□ -0.22
UPK3A-201ENST00000216211 MBD3L4A6NDZ8 208 aaPredicted RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 MBD3L3A6NE82 208 aaPredicted RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 MBD3L5A6NJ08 208 aaPredicted RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 COPEO14579 308 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 KRT6AP02538 564 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 KRT6BP04259 564 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 IL3P08700 152 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 DHRS4L1P0CG22 281 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 DRD4P21917 467 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 TACR1P25103 407 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 CRHR1P34998 444 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 PEX19P40855 299 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 PPICP45877 212 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 KRT6CP48668 564 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 HTR6P50406 440 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 DCAF7P61962 342 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 CSTF3Q12996 717 aaKnown RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 FBXL19-AS1Q494R0 122 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 HHATQ5VTY9 493 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 CCDC116Q8IYX3 515 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 MBD3L2Q8NHZ7 208 aaPredicted RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 RDH11Q8TC12 318 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 KAT2AQ92830 837 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 EXOSC8Q96B26 276 aaKnown RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 TMEM237Q96Q45 408 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
UPK3A-201ENST00000216211 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 RASSF1Q9NS23 344 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 MCM8Q9UJA3 840 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 CBLCQ9ULV8 474 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
UPK3A-201ENST00000216211 PRRC2AP48634 2157 aaKnown RBP13.65□□□□□ -0.22
UPK3A-201ENST00000216211 NF1P21359 2839 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 PCNX3Q9H6A9 2034 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 FAM221AA4D161 298 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 PRAMEF25A6NGN4 478 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 FRG2CA6NGY1 282 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 CD8B2A6NJW9 211 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 A6NNC1 897 aa13.65□□□□□ -0.22
UPK3A-201ENST00000216211 NDUFAB1O14561 156 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms